7T92
Structure of the peroxisomal retro-translocon formed by a heterotrimeric ubiquitin ligase complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005778 | cellular_component | peroxisomal membrane |
A | 0007031 | biological_process | peroxisome organization |
A | 0008270 | molecular_function | zinc ion binding |
A | 0016558 | biological_process | protein import into peroxisome matrix |
B | 0004842 | molecular_function | ubiquitin-protein transferase activity |
B | 0005777 | cellular_component | peroxisome |
B | 0005778 | cellular_component | peroxisomal membrane |
B | 0006513 | biological_process | protein monoubiquitination |
B | 0008270 | molecular_function | zinc ion binding |
B | 0015031 | biological_process | protein transport |
B | 0016020 | cellular_component | membrane |
B | 0016558 | biological_process | protein import into peroxisome matrix |
B | 0016562 | biological_process | protein import into peroxisome matrix, receptor recycling |
B | 0016567 | biological_process | protein ubiquitination |
B | 0046872 | molecular_function | metal ion binding |
B | 1990429 | cellular_component | peroxisomal importomer complex |
C | 0005777 | cellular_component | peroxisome |
C | 0005778 | cellular_component | peroxisomal membrane |
C | 0007031 | biological_process | peroxisome organization |
C | 0008270 | molecular_function | zinc ion binding |
C | 0015031 | biological_process | protein transport |
C | 0016020 | cellular_component | membrane |
C | 0016558 | biological_process | protein import into peroxisome matrix |
C | 0016562 | biological_process | protein import into peroxisome matrix, receptor recycling |
C | 0016567 | biological_process | protein ubiquitination |
C | 0016740 | molecular_function | transferase activity |
C | 0046872 | molecular_function | metal ion binding |
Functional Information from PROSITE/UniProt
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 123 |
Details | TOPO_DOM: Peroxisomal matrix => ECO:0000305|PubMed:35768507 |
Chain | Residue | Details |
C | MET1-ALA23 | |
C | THR77-SER132 | |
C | GLY230-GLY276 |
site_id | SWS_FT_FI2 |
Number of Residues | 29 |
Details | TRANSMEM: Helical; Name=TM1 => ECO:0000269|PubMed:35768507, ECO:0007744|PDB:7T92 |
Chain | Residue | Details |
C | ALA24-ARG53 | |
A | GLU136-SER145 |
site_id | SWS_FT_FI3 |
Number of Residues | 193 |
Details | TOPO_DOM: Cytoplasmic => ECO:0000305|PubMed:35768507 |
Chain | Residue | Details |
C | GLY54 | |
C | GLN166-VAL201 | |
C | ARG297-ALA454 |
site_id | SWS_FT_FI4 |
Number of Residues | 21 |
Details | TRANSMEM: Helical; Name=TM2 => ECO:0000269|PubMed:35768507, ECO:0007744|PDB:7T92 |
Chain | Residue | Details |
C | ALA55-LEU76 | |
A | GLY177-SER203 |
site_id | SWS_FT_FI5 |
Number of Residues | 32 |
Details | TRANSMEM: Helical; Name=TM3 => ECO:0000269|PubMed:35768507, ECO:0007744|PDB:7T92 |
Chain | Residue | Details |
C | LEU133-LEU165 |
site_id | SWS_FT_FI6 |
Number of Residues | 27 |
Details | TRANSMEM: Helical; Name=TM4 => ECO:0000269|PubMed:35768507, ECO:0007744|PDB:7T92 |
Chain | Residue | Details |
C | LEU202-THR229 |
site_id | SWS_FT_FI7 |
Number of Residues | 19 |
Details | TRANSMEM: Helical; Name=TM5 => ECO:0000269|PubMed:35768507, ECO:0007744|PDB:7T92 |
Chain | Residue | Details |
C | TYR277-VAL296 |
site_id | SWS_FT_FI8 |
Number of Residues | 38 |
Details | ZN_FING: RING-type => ECO:0000255|PROSITE-ProRule:PRU00175 |
Chain | Residue | Details |
C | CYS402-ARG440 |
site_id | SWS_FT_FI9 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000269|PubMed:35768507, ECO:0007744|PDB:7T92 |
Chain | Residue | Details |
C | CYS402 | |
C | CYS405 | |
C | CYS417 | |
C | HIS419 | |
C | CYS422 | |
C | CYS425 | |
C | CYS436 | |
C | CYS439 |