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7D5V

Structure of the C646A mutant of peptidylarginine deiminase type III (PAD3)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004668molecular_functionprotein-arginine deiminase activity
A0005509molecular_functioncalcium ion binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0016787molecular_functionhydrolase activity
A0042802molecular_functionidentical protein binding
A0043231cellular_componentintracellular membrane-bounded organelle
B0004668molecular_functionprotein-arginine deiminase activity
B0005509molecular_functioncalcium ion binding
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0016787molecular_functionhydrolase activity
B0042802molecular_functionidentical protein binding
B0043231cellular_componentintracellular membrane-bounded organelle
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue EDO A 701
ChainResidue
AGLU24
AGLY59
AARG60
AHOH882

site_idAC2
Number of Residues5
Detailsbinding site for residue EDO A 702
ChainResidue
AGLY47
ATRP68
AARG69
AHOH837
AHOH877

site_idAC3
Number of Residues3
Detailsbinding site for residue EDO A 703
ChainResidue
AHIS91
ATYR111
AHOH874

site_idAC4
Number of Residues3
Detailsbinding site for residue EDO A 704
ChainResidue
ATHR299
AGLU353
ALEU354

site_idAC5
Number of Residues7
Detailsbinding site for residue EDO A 705
ChainResidue
ASER492
AGLY494
AALA495
ALYS498
AASP568
AHOH888
BARG8

site_idAC6
Number of Residues7
Detailsbinding site for residue EDO A 706
ChainResidue
AGLN501
AILE538
ALYS542
AHOH915
AHOH950
BTYR30
BGLY31

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO A 707
ChainResidue
AGLN4
BTRP550
BVAL554
BARG557

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 708
ChainResidue
ATRP550
AVAL554
AARG557
BGLN4

site_idAC9
Number of Residues4
Detailsbinding site for residue EDO A 709
ChainResidue
AASP49
AILE52
AGLU61
AARG62

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO A 710
ChainResidue
AASP536
ALEU537
ATYR540
ALYS574
ATHR575

site_idAD2
Number of Residues7
Detailsbinding site for residue EDO A 711
ChainResidue
AARG67
AHIS97
ASER98
AGLU101
APRO102
ALEU103
AHOH911

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO A 713
ChainResidue
APHE40
APHE70
AASP71
ALEU74

site_idAD4
Number of Residues5
Detailsbinding site for residue EDO A 714
ChainResidue
AARG8
AASP28
BARG552
BGLU563
BEDO702

site_idAD5
Number of Residues5
Detailsbinding site for residue GOL A 715
ChainResidue
ASER16
AASP273
ASER275
AASN276
AHOH936

site_idAD6
Number of Residues5
Detailsbinding site for residue GOL A 716
ChainResidue
AGLU178
AASP179
ALYS362
APRO387
AASP388

site_idAD7
Number of Residues1
Detailsbinding site for residue GOL A 717
ChainResidue
AGLU252

site_idAD8
Number of Residues6
Detailsbinding site for residue GOL A 718
ChainResidue
AGLU41
AVAL42
AASP64
AARG66
AHOH821
AHOH839

site_idAD9
Number of Residues7
Detailsbinding site for residue EDO B 701
ChainResidue
BGLU101
BLEU105
BARG510
BSER527
BASN529
BGLN530
BHOH809

site_idAE1
Number of Residues7
Detailsbinding site for residue EDO B 702
ChainResidue
AARG8
AEDO714
BSER492
BALA495
BLYS498
BASP568
BHOH956

site_idAE2
Number of Residues3
Detailsbinding site for residue EDO B 703
ChainResidue
BLEU11
BALA106
BTYR107

site_idAE3
Number of Residues4
Detailsbinding site for residue EDO B 704
ChainResidue
BARG62
BASP49
BILE52
BGLU61

site_idAE4
Number of Residues8
Detailsbinding site for residue EDO B 705
ChainResidue
AGLY31
AHOH867
BPHE497
BGLN501
BILE538
BHOH894
BHOH947
BHOH950

site_idAE5
Number of Residues4
Detailsbinding site for residue EDO B 706
ChainResidue
BGLU24
BGLY59
BARG60
BHOH888

site_idAE6
Number of Residues5
Detailsbinding site for residue EDO B 707
ChainResidue
BASP536
BLEU537
BTYR540
BLYS574
BTHR575

site_idAE7
Number of Residues3
Detailsbinding site for residue EDO B 708
ChainResidue
BHIS91
BTYR111
BHOH833

site_idAE8
Number of Residues6
Detailsbinding site for residue EDO B 709
ChainResidue
BARG67
BHIS97
BSER98
BSER99
BGLU101
BPRO102

site_idAE9
Number of Residues5
Detailsbinding site for residue EDO B 710
ChainResidue
BLEU306
BTHR363
BPRO365
BARG652
BHOH921

site_idAF1
Number of Residues4
Detailsbinding site for residue EDO B 711
ChainResidue
BGLU41
BVAL42
BASP64
BARG66

site_idAF2
Number of Residues5
Detailsbinding site for residue GOL B 712
ChainResidue
BSER16
BASP273
BSER275
BASN276
BHOH871

site_idAF3
Number of Residues4
Detailsbinding site for residue GOL B 713
ChainResidue
BASP176
BASP179
BLYS362
BASP388

site_idAF4
Number of Residues5
Detailsbinding site for residue GOL B 714
ChainResidue
BASN153
BCYS154
BGLU252
BGLY253
BLEU254

site_idAF5
Number of Residues7
Detailsbinding site for residue GOL B 715
ChainResidue
BPHE40
BPHE70
BASP71
BALA72
BLEU74
BTYR96
BHOH911

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PDB entries from 2024-05-15

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