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7AWD

Crystal structure of Peroxisome proliferator-activated receptor gamma (PPARG)in complex with garcinoic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue NQD A 501
ChainResidue
APRO227
ATYR327
AMET329
AHIS449
ATYR473
ANQD502
ALEU228
ACYS285
AGLN286
AARG288
ASER289
AGLU295
AHIS323
AILE326

site_idAC2
Number of Residues14
Detailsbinding site for residue NQD A 502
ChainResidue
AGLU259
AILE262
APHE264
AGLN273
AARG280
AILE281
ACYS285
AARG288
ALEU333
ALEU340
AILE341
ASER342
ANQD501
AHOH677

site_idAC3
Number of Residues3
Detailsbinding site for residue CIT A 503
ChainResidue
ALEU318
AHOH607
AHOH607

site_idAC4
Number of Residues5
Detailsbinding site for residue GOL A 504
ChainResidue
AASN335
ALYS336
AHOH610
AHOH638
AHOH698

site_idAC5
Number of Residues8
Detailsbinding site for residue GOL A 505
ChainResidue
AARG212
ALYS336
AASP337
AGLU351
AASN424
AHOH613
AHOH630
AHOH670

site_idAC6
Number of Residues8
Detailsbinding site for residue GOL A 506
ChainResidue
AMET202
AGLN203
ALEU204
AARG212
AASN335
AASP337
ALEU419
AHOH605

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
ChainResidueDetails
ATYR473
AGLN286
AHIS323
AHIS449

site_idSWS_FT_FI2
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
ChainResidueDetails
ALYS224

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PDB entries from 2024-06-12

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