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6ZDY

Crystal structure of WT murine S100A9 bound to calcium and zinc

Functional Information from GO Data
ChainGOidnamespacecontents
A0001533cellular_componentcornified envelope
A0002523biological_processleukocyte migration involved in inflammatory response
A0002544biological_processchronic inflammatory response
A0002790biological_processpeptide secretion
A0002793biological_processpositive regulation of peptide secretion
A0005509molecular_functioncalcium ion binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005856cellular_componentcytoskeleton
A0005886cellular_componentplasma membrane
A0006417biological_processregulation of translation
A0006914biological_processautophagy
A0006915biological_processapoptotic process
A0006919biological_processactivation of cysteine-type endopeptidase activity involved in apoptotic process
A0006935biological_processchemotaxis
A0006954biological_processinflammatory response
A0010976biological_processpositive regulation of neuron projection development
A0014002biological_processastrocyte development
A0016209molecular_functionantioxidant activity
A0018119biological_processpeptidyl-cysteine S-nitrosylation
A0030036biological_processactin cytoskeleton organization
A0030194biological_processpositive regulation of blood coagulation
A0030593biological_processneutrophil chemotaxis
A0030595biological_processleukocyte chemotaxis
A0032496biological_processresponse to lipopolysaccharide
A0034121biological_processregulation of toll-like receptor signaling pathway
A0035425biological_processautocrine signaling
A0043542biological_processendothelial cell migration
A0045087biological_processinnate immune response
A0045113biological_processregulation of integrin biosynthetic process
A0046872molecular_functionmetal ion binding
A0048306molecular_functioncalcium-dependent protein binding
A0050729biological_processpositive regulation of inflammatory response
A0060264biological_processregulation of respiratory burst involved in inflammatory response
A0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
A0070488biological_processneutrophil aggregation
A0098869biological_processcellular oxidant detoxification
A1990660cellular_componentcalprotectin complex
A1990662cellular_componentS100A9 complex
A2001244biological_processpositive regulation of intrinsic apoptotic signaling pathway
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue CA A 201
ChainResidue
ASER24
AGLU27
AHIS29
ATHR32
AGLU37
AHOH355

site_idAC2
Number of Residues6
Detailsbinding site for residue CA A 202
ChainResidue
AGLN74
AGLU79
AHOH356
AASP68
AASN70
AASP72

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 203
ChainResidue
AHIS21
AASP31
AHIS92
AHIS96

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 204
ChainResidue
AGLU65
AHIS103
AHIS105
AHIS107

site_idAC5
Number of Residues10
Detailsbinding site for residue SO4 A 205
ChainResidue
ALYS35
ALYS35
AARG39
AARG39
AASN61
AASN61
AHIS105
AHIS105
AHOH340
AHOH340

Functional Information from PROSITE/UniProt
site_idPS00303
Number of Residues22
DetailsS100_CABP S-100/ICaBP type calcium binding protein signature. IMedLDtnqDnqlSFeECmmLM
ChainResidueDetails
AILE63-MET84

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues13
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P06702
ChainResidueDetails
AHIS21
AGLN74
AGLU79
AHIS92
AHIS96
ASER24
AHIS29
AASP31
ATHR32
AGLU37
AASP68
AASN70
AASP72

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0000269|PubMed:8645219
ChainResidueDetails
AALA2

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Pros-methylhistidine => ECO:0000269|PubMed:33563959, ECO:0000269|PubMed:34562450
ChainResidueDetails
AHIS107

220113

PDB entries from 2024-05-22

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