6Z27
Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV LCP crystallization
Functional Information from GO Data
Chain | GOid | namespace | contents |
H | 0015979 | biological_process | photosynthesis |
H | 0016020 | cellular_component | membrane |
H | 0019684 | biological_process | photosynthesis, light reaction |
H | 0030077 | cellular_component | plasma membrane light-harvesting complex |
H | 0042314 | molecular_function | bacteriochlorophyll binding |
H | 0042717 | cellular_component | plasma membrane-derived chromatophore membrane |
H | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
L | 0009772 | biological_process | photosynthetic electron transport in photosystem II |
L | 0015979 | biological_process | photosynthesis |
L | 0016020 | cellular_component | membrane |
L | 0019684 | biological_process | photosynthesis, light reaction |
L | 0030077 | cellular_component | plasma membrane light-harvesting complex |
L | 0042314 | molecular_function | bacteriochlorophyll binding |
L | 0042717 | cellular_component | plasma membrane-derived chromatophore membrane |
L | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
L | 0046872 | molecular_function | metal ion binding |
M | 0009772 | biological_process | photosynthetic electron transport in photosystem II |
M | 0015979 | biological_process | photosynthesis |
M | 0016020 | cellular_component | membrane |
M | 0019684 | biological_process | photosynthesis, light reaction |
M | 0030077 | cellular_component | plasma membrane light-harvesting complex |
M | 0042314 | molecular_function | bacteriochlorophyll binding |
M | 0042717 | cellular_component | plasma membrane-derived chromatophore membrane |
M | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
M | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue LDA H 701 |
Chain | Residue |
H | TRP21 |
H | LDA702 |
M | PRO200 |
M | ALA207 |
M | MET272 |
M | BCL405 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue LDA H 702 |
Chain | Residue |
M | ARG253 |
M | PHE258 |
H | GLN32 |
H | TYR40 |
H | LDA701 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue PO4 H 703 |
Chain | Residue |
H | HIS128 |
H | ASN129 |
H | LYS132 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue PO4 H 704 |
Chain | Residue |
H | THR90 |
H | HIS141 |
H | VAL142 |
H | ASN147 |
site_id | AC5 |
Number of Residues | 2 |
Details | binding site for residue PO4 H 705 |
Chain | Residue |
H | GLY71 |
H | THR72 |
site_id | AC6 |
Number of Residues | 13 |
Details | binding site for residue OLC L 301 |
Chain | Residue |
L | LEU185 |
L | HIS190 |
L | LEU193 |
L | ASP213 |
L | PHE216 |
L | SER223 |
L | ILE224 |
L | GLY225 |
L | THR226 |
L | ILE229 |
L | HOH436 |
L | HOH444 |
M | BCL404 |
site_id | AC7 |
Number of Residues | 2 |
Details | binding site for residue LDA L 302 |
Chain | Residue |
L | ALA78 |
L | GLN87 |
site_id | AC8 |
Number of Residues | 20 |
Details | binding site for residue BCL L 303 |
Chain | Residue |
L | PHE97 |
L | ALA124 |
L | ILE125 |
L | ALA127 |
L | LEU131 |
L | TRP156 |
L | THR160 |
L | HIS168 |
L | HIS173 |
L | ALA176 |
L | ILE177 |
L | PHE180 |
L | SER244 |
L | CYS247 |
L | MET248 |
L | BPH304 |
M | TYR210 |
M | BCL403 |
M | BCL404 |
M | BCL405 |
site_id | AC9 |
Number of Residues | 20 |
Details | binding site for residue BPH L 304 |
Chain | Residue |
L | ILE49 |
L | PHE97 |
L | TRP100 |
L | GLU104 |
L | ILE117 |
L | ALA120 |
L | PHE121 |
L | ALA124 |
L | TYR148 |
L | GLY149 |
L | ILE150 |
L | HIS153 |
L | VAL241 |
L | BCL303 |
M | TYR210 |
M | ALA213 |
M | LEU214 |
M | TRP252 |
M | MET256 |
M | BCL405 |
site_id | AD1 |
Number of Residues | 11 |
Details | binding site for residue OLC M 401 |
Chain | Residue |
M | PHE67 |
M | GLY71 |
M | TRP75 |
M | MET122 |
M | TRP157 |
M | GLY161 |
M | PHE162 |
M | VAL175 |
M | TYR177 |
M | HIS182 |
M | BCL403 |
site_id | AD2 |
Number of Residues | 3 |
Details | binding site for residue LDA M 402 |
Chain | Residue |
M | LEU167 |
M | THR289 |
M | ASP292 |
site_id | AD3 |
Number of Residues | 20 |
Details | binding site for residue BCL M 403 |
Chain | Residue |
M | MET122 |
M | TRP157 |
M | ILE179 |
M | HIS182 |
M | LEU183 |
M | THR186 |
M | OLC401 |
M | BCL404 |
M | BPH406 |
M | HOH532 |
L | HIS168 |
L | MET174 |
L | ILE177 |
L | THR178 |
L | PHE181 |
L | THR182 |
L | LEU185 |
L | BCL303 |
M | TRP66 |
M | PHE67 |
site_id | AD4 |
Number of Residues | 24 |
Details | binding site for residue BCL M 404 |
Chain | Residue |
L | VAL157 |
L | TYR162 |
L | HIS168 |
L | PHE181 |
L | OLC301 |
L | BCL303 |
M | ALA153 |
M | LEU156 |
M | LEU160 |
M | THR186 |
M | ASN187 |
M | SER190 |
M | LEU196 |
M | PHE197 |
M | HIS202 |
M | SER205 |
M | ILE206 |
M | TYR210 |
M | VAL276 |
M | GLY280 |
M | ILE284 |
M | BCL403 |
M | BCL405 |
M | BPH406 |
site_id | AD5 |
Number of Residues | 16 |
Details | binding site for residue BCL M 405 |
Chain | Residue |
H | LDA701 |
L | TYR128 |
L | PHE146 |
L | ILE150 |
L | HIS153 |
L | LEU154 |
L | BCL303 |
L | BPH304 |
M | PHE197 |
M | GLY203 |
M | ILE206 |
M | ALA207 |
M | TYR210 |
M | GLY211 |
M | BCL404 |
M | HOH530 |
site_id | AD6 |
Number of Residues | 16 |
Details | binding site for residue BPH M 406 |
Chain | Residue |
L | PHE181 |
L | LEU185 |
L | LEU189 |
M | SER59 |
M | LEU60 |
M | GLY63 |
M | PHE67 |
M | TRP129 |
M | THR146 |
M | ALA149 |
M | PHE150 |
M | ALA153 |
M | ALA273 |
M | THR277 |
M | BCL403 |
M | BCL404 |
site_id | AD7 |
Number of Residues | 5 |
Details | binding site for residue FE M 407 |
Chain | Residue |
L | HIS190 |
L | HIS230 |
M | HIS219 |
M | GLU234 |
M | HIS266 |
site_id | AD8 |
Number of Residues | 17 |
Details | binding site for residue U10 M 408 |
Chain | Residue |
L | PHE29 |
L | GLY35 |
L | THR38 |
L | ARG103 |
M | MET218 |
M | HIS219 |
M | THR222 |
M | ALA248 |
M | ALA249 |
M | TRP252 |
M | MET256 |
M | PHE258 |
M | ASN259 |
M | ALA260 |
M | THR261 |
M | ILE265 |
M | TRP268 |
site_id | AD9 |
Number of Residues | 3 |
Details | binding site for residue LDA M 409 |
Chain | Residue |
M | PHE7 |
M | TRP41 |
M | PHE42 |
site_id | AE1 |
Number of Residues | 3 |
Details | binding site for residue LDA M 410 |
Chain | Residue |
L | VAL220 |
M | GLY31 |
M | VAL32 |
site_id | AE2 |
Number of Residues | 1 |
Details | binding site for residue LDA M 411 |
Chain | Residue |
M | GLY257 |
site_id | AE3 |
Number of Residues | 6 |
Details | binding site for residue PO4 M 412 |
Chain | Residue |
L | ASN199 |
L | LYS202 |
L | HOH414 |
M | HIS145 |
M | ARG267 |
M | PO4415 |
site_id | AE4 |
Number of Residues | 5 |
Details | binding site for residue PO4 M 413 |
Chain | Residue |
M | ASN25 |
M | ASN28 |
M | TYR51 |
M | GLY53 |
M | SER54 |
site_id | AE5 |
Number of Residues | 3 |
Details | binding site for residue PO4 M 414 |
Chain | Residue |
M | SER36 |
M | THR37 |
M | LEU38 |
site_id | AE6 |
Number of Residues | 6 |
Details | binding site for residue PO4 M 415 |
Chain | Residue |
L | LYS202 |
M | GLY143 |
M | LYS144 |
M | HIS145 |
M | PO4412 |
M | HOH503 |
site_id | AE7 |
Number of Residues | 5 |
Details | binding site for residue PO4 M 416 |
Chain | Residue |
M | TYR3 |
M | GLN4 |
M | ASN5 |
M | ILE6 |
M | PHE7 |
site_id | AE8 |
Number of Residues | 4 |
Details | binding site for residue EDO M 417 |
Chain | Residue |
H | HIS126 |
M | MET20 |
M | THR21 |
M | GLU22 |
Functional Information from PROSITE/UniProt
site_id | PS00244 |
Number of Residues | 27 |
Details | REACTION_CENTER Photosynthetic reaction center proteins signature. NlfynPfHglSiaflygsallfAmHGA |
Chain | Residue | Details |
M | ASN195-ALA221 | |
L | ASN166-ALA192 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 134 |
Details | TRANSMEM: Helical |
Chain | Residue | Details |
M | GLY53-GLY79 | |
M | LYS110-ALA139 | |
M | MET142-LEU167 | |
M | PHE197-ALA225 | |
M | ASN259-LEU285 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: axial binding residue |
Chain | Residue | Details |
L | HIS116-MET138 | |
L | PRO171-ALA198 | |
L | GLY225-ILE250 | |
M | HIS182 | |
M | HIS202 |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | BINDING: |
Chain | Residue | Details |
M | HIS266 | |
M | HIS219 | |
M | GLU234 | |
M | TRP252 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | BINDING: axial binding residue |
Chain | Residue | Details |
L | HIS153 | |
L | HIS173 |
site_id | SWS_FT_FI5 |
Number of Residues | 3 |
Details | BINDING: |
Chain | Residue | Details |
L | HIS230 | |
L | HIS190 | |
L | PHE216 |