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6YXW

Affimer K3 - KRAS protein complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0007165biological_processsignal transduction
A0016020cellular_componentmembrane
B0004869molecular_functioncysteine-type endopeptidase inhibitor activity
C0003924molecular_functionGTPase activity
C0005525molecular_functionGTP binding
C0007165biological_processsignal transduction
C0016020cellular_componentmembrane
D0004869molecular_functioncysteine-type endopeptidase inhibitor activity
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue GDP A 201
ChainResidue
AGLY12
ATYR32
AASN116
ALYS117
AASP119
ASER145
AALA146
ALYS147
AMG202
AHOH301
AHOH304
AGLY13
AHOH314
AVAL14
AGLY15
ALYS16
ASER17
AALA18
APHE28
AASP30

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 202
ChainResidue
ASER17
AGDP201
AHOH301
AHOH304
AHOH308
AHOH314

site_idAC3
Number of Residues20
Detailsbinding site for residue GDP C 201
ChainResidue
CGLY13
CVAL14
CGLY15
CLYS16
CSER17
CALA18
CPHE28
CVAL29
CASP30
CASN116
CLYS117
CASP119
CSER145
CALA146
CLYS147
CMG202
CHOH303
CHOH309
CHOH310
CHOH318

site_idAC4
Number of Residues6
Detailsbinding site for residue MG C 202
ChainResidue
CSER17
CGDP201
CHOH302
CHOH303
CHOH309
CHOH322

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
ChainResidueDetails
AGLY10
AVAL29
AALA59
AASN116
CGLY10
CVAL29
CALA59
CASN116

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N-acetylmethionine; in GTPase KRas; alternate => ECO:0000269|Ref.17
ChainResidueDetails
CMET1
AMET1

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N-acetylthreonine; in GTPase KRas, N-terminally processed => ECO:0000269|Ref.17
ChainResidueDetails
CTHR2
ATHR2

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:22711838
ChainResidueDetails
CLYS104
ALYS104

site_idSWS_FT_FI5
Number of Residues2
DetailsCARBOHYD: (Microbial infection) O-linked (Glc) threonine; by P.sordellii toxin TcsL => ECO:0000269|PubMed:19744486
ChainResidueDetails
CTHR35
ATHR35

219869

PDB entries from 2024-05-15

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