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6WKU

Twelve Chloride Ions Drive Assembly of Human alpha345 Collagen IV NC1 domain

Functional Information from GO Data
ChainGOidnamespacecontents
A0005201molecular_functionextracellular matrix structural constituent
A0005581cellular_componentcollagen trimer
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue CL A 701
ChainResidue
AALA74
AARG76
AASP78
AARG179

site_idAC2
Number of Residues5
Detailsbinding site for residue CL A 702
ChainResidue
AARG300
AASN301
AASP302
AHOH955
AHOH975

site_idAC3
Number of Residues6
Detailsbinding site for residue CL A 703
ChainResidue
AALA523
AARG525
AASP527
AGLY627
AARG628
AHOH880

site_idAC4
Number of Residues5
Detailsbinding site for residue CL A 704
ChainResidue
ASER186
ATYR189
ATYR288
AASN290
APG4756

site_idAC5
Number of Residues5
Detailsbinding site for residue CL A 705
ChainResidue
AASN66
APHE408
AALA409
ATYR638
APGE709

site_idAC6
Number of Residues3
Detailsbinding site for residue CL A 706
ChainResidue
ATYR412
AASN515
AALA635

site_idAC7
Number of Residues16
Detailsbinding site for residue P6G A 707
ChainResidue
AARG99
AALA341
AVAL342
AHIS343
AGLN345
ALEU380
ALEU456
AVAL476
ATYR477
AALA499
ALEU503
AARG504
APG4728
APGE729
AHOH814
AHOH826

site_idAC8
Number of Residues8
Detailsbinding site for residue PGE A 708
ChainResidue
AASP270
AGLY377
AGLY604
AALA606
APEG713
AHOH881
AHOH937
AHOH1088

site_idAC9
Number of Residues12
Detailsbinding site for residue PGE A 709
ChainResidue
AASN68
AVAL70
AASN72
ALEU313
APRO314
AHIS406
APHE407
ACL705
APEG720
AHOH840
AHOH882
AHOH908

site_idAD1
Number of Residues12
Detailsbinding site for residue PGE A 710
ChainResidue
AASN197
AGLU199
AARG200
AARG203
AILE206
AGLU536
APRO537
APRO539
ASER549
APHE553
APGE711
AHOH992

site_idAD2
Number of Residues5
Detailsbinding site for residue PGE A 711
ChainResidue
ASER195
AILE206
APGE710
APGE718
APEG723

site_idAD3
Number of Residues5
Detailsbinding site for residue PG4 A 712
ChainResidue
AILE574
AGLN575
ATYR590
AARG670
AHOH835

site_idAD4
Number of Residues5
Detailsbinding site for residue PEG A 713
ChainResidue
AASP270
ASER382
APGE708
APEG746
AHOH1043

site_idAD5
Number of Residues6
Detailsbinding site for residue PEG A 714
ChainResidue
AASP69
APHE617
AALA661
AARG665
AHOH845
AHOH1084

site_idAD6
Number of Residues7
Detailsbinding site for residue PGE A 715
ChainResidue
APHE455
ALEU456
APEG746
AEDO778
AHOH831
AGLN338
AVAL340

site_idAD7
Number of Residues9
Detailsbinding site for residue PG4 A 716
ChainResidue
AALA94
APRO95
APRO207
ASER208
ATHR209
AGLN299
AGLN548
APGE718
AHOH1021

site_idAD8
Number of Residues1
Detailsbinding site for residue EDO A 717
ChainResidue
AGLN347

site_idAD9
Number of Residues8
Detailsbinding site for residue PGE A 718
ChainResidue
ASER208
AVAL210
AGLU214
AGLN548
APGE711
APG4716
APEG723
APGE738

site_idAE1
Number of Residues2
Detailsbinding site for residue EDO A 719
ChainResidue
ASER585
ALEU586

site_idAE2
Number of Residues5
Detailsbinding site for residue PEG A 720
ChainResidue
AMET315
AMET316
ATHR658
ALYS660
APGE709

site_idAE3
Number of Residues15
Detailsbinding site for residue 1PE A 721
ChainResidue
APRO86
AALA87
ALEU88
APHE168
AARG169
AALA170
ATYR184
AHIS292
AGLN293
APG4756
APEG789
AEDO792
AHOH808
AHOH959
AHOH1067

site_idAE4
Number of Residues9
Detailsbinding site for residue PGE A 722
ChainResidue
AVAL67
AASN68
AASN515
AVAL519
AMET538
AMET542
AEDO750
AHOH824
AHOH932

site_idAE5
Number of Residues5
Detailsbinding site for residue PEG A 723
ChainResidue
ASER195
ALEU196
ALYS217
APGE711
APGE718

site_idAE6
Number of Residues3
Detailsbinding site for residue PGE A 724
ChainResidue
AARG250
ATRP252
ATHR253

site_idAE7
Number of Residues3
Detailsbinding site for residue EDO A 725
ChainResidue
ALEU313
ATYR326
AHOH1000

site_idAE8
Number of Residues7
Detailsbinding site for residue PG4 A 727
ChainResidue
ASER344
AASP346
ASER348
AALA421
AARG504
AARG505
AHOH1008

site_idAE9
Number of Residues8
Detailsbinding site for residue PG4 A 728
ChainResidue
AARG99
ACYS352
APRO353
AGLN354
AGLU561
AP6G707
APGE729
AHOH981

site_idAF1
Number of Residues5
Detailsbinding site for residue PGE A 729
ChainResidue
AGLU102
APRO103
AP6G707
APG4728
AHOH942

site_idAF2
Number of Residues4
Detailsbinding site for residue PGE A 730
ChainResidue
AGLU199
AMET201
APEG761
AHOH1027

site_idAF3
Number of Residues1
Detailsbinding site for residue EDO A 731
ChainResidue
AHOH802

site_idAF4
Number of Residues4
Detailsbinding site for residue PEG A 732
ChainResidue
ATHR125
AASP126
AARG221
APGE738

site_idAF5
Number of Residues5
Detailsbinding site for residue PGE A 733
ChainResidue
AALA117
AALA159
ASER160
AHOH825
AHOH995

site_idAF6
Number of Residues4
Detailsbinding site for residue PEG A 734
ChainResidue
AVAL67
AGLU536
ATYR633
APEG740

site_idAF7
Number of Residues3
Detailsbinding site for residue PEG A 735
ChainResidue
AGLN347
AARG446
AEDO774

site_idAF8
Number of Residues9
Detailsbinding site for residue PGE A 736
ChainResidue
AGLY5
APHE6
AVAL7
AVAL566
AILE567
AALA608
ASER609
AEDO778
AHOH1125

site_idAF9
Number of Residues5
Detailsbinding site for residue PEG A 737
ChainResidue
AARG10
AILE17
APRO18
ASER19
AHOH997

site_idAG1
Number of Residues3
Detailsbinding site for residue PGE A 738
ChainResidue
APGE718
APEG732
AHOH878

site_idAG2
Number of Residues1
Detailsbinding site for residue PEG A 739
ChainResidue
ATHR15

site_idAG3
Number of Residues2
Detailsbinding site for residue PEG A 740
ChainResidue
APEG734
AHOH843

site_idAG4
Number of Residues8
Detailsbinding site for residue PGE A 741
ChainResidue
AILE17
ASER29
AGLY30
APHE31
AGLN55
AGLU102
AARG107
APGE742

site_idAG5
Number of Residues4
Detailsbinding site for residue PGE A 742
ChainResidue
AGLN55
AGLU102
AMET650
APGE741

site_idAG6
Number of Residues2
Detailsbinding site for residue EDO A 743
ChainResidue
ASER358
ALEU359

site_idAG7
Number of Residues2
Detailsbinding site for residue EDO A 744
ChainResidue
AGLU241
AARG329

site_idAG8
Number of Residues6
Detailsbinding site for residue PEG A 745
ChainResidue
AGLN468
ACYS469
ASER648
AASP649
AARG667
AHOH921

site_idAG9
Number of Residues5
Detailsbinding site for residue PEG A 746
ChainResidue
AGLN338
AALA339
APEG713
APGE715
AEDO778

site_idAH1
Number of Residues8
Detailsbinding site for residue EDO A 747
ChainResidue
ATHR97
AGLY98
AARG99
AALA100
ATYR477
AGLU478
AHOH1113
AHOH1124

site_idAH2
Number of Residues3
Detailsbinding site for residue PGE A 748
ChainResidue
APRO453
AGLY472
AGLU561

site_idAH3
Number of Residues2
Detailsbinding site for residue EDO A 749
ChainResidue
AGLN551
APEG788

site_idAH4
Number of Residues3
Detailsbinding site for residue EDO A 750
ChainResidue
AASN517
APGE722
AHOH877

site_idAH5
Number of Residues6
Detailsbinding site for residue PG4 A 751
ChainResidue
APRO114
AGLY133
AILE135
AGLY227
ATHR228
AGLU334

site_idAH6
Number of Residues10
Detailsbinding site for residue PG4 A 752
ChainResidue
AARG4
APHE6
AALA115
AILE116
AGLY227
AGLY229
APHE230
AGLU334
AALA335
APRO336

site_idAH7
Number of Residues8
Detailsbinding site for residue PG4 A 753
ChainResidue
AGLN347
ATYR363
AASP389
AGLN438
AARG441
AGLN442
AEDO774
AHOH863

site_idAH8
Number of Residues8
Detailsbinding site for residue PGE A 754
ChainResidue
AALA311
ALEU313
AALA392
ASER437
AASN518
AHOH852
AHOH1085
AHOH1089

site_idAH9
Number of Residues8
Detailsbinding site for residue PGE A 755
ChainResidue
AARG4
AALA337
AGLN338
AALA452
APRO453
AGLY454
APHE455
AALA564

site_idAI1
Number of Residues9
Detailsbinding site for residue PG4 A 756
ChainResidue
AMET93
AASN183
ATYR184
ASER186
AASN290
AHIS292
AHIS296
ACL704
A1PE721

site_idAI2
Number of Residues4
Detailsbinding site for residue PEG A 757
ChainResidue
AILE349
APRO351
ACYS352
AGLN448

site_idAI3
Number of Residues4
Detailsbinding site for residue PEG A 758
ChainResidue
ATHR355
AARG357
APEG759
AEDO760

site_idAI4
Number of Residues4
Detailsbinding site for residue PEG A 759
ChainResidue
ATHR355
AARG357
AVAL451
APEG758

site_idAI5
Number of Residues2
Detailsbinding site for residue EDO A 760
ChainResidue
ALEU246
APEG758

site_idAI6
Number of Residues4
Detailsbinding site for residue PEG A 761
ChainResidue
APRO198
AGLU199
AARG324
APGE730

site_idAI7
Number of Residues6
Detailsbinding site for residue EDO A 762
ChainResidue
ATYR28
ACYS53
AVAL569
AHIS570
APEG781
AHOH801

site_idAI8
Number of Residues5
Detailsbinding site for residue PEG A 763
ChainResidue
AGLY44
AASP46
ATHR154
AGLY155
AALA157

site_idAI9
Number of Residues4
Detailsbinding site for residue EDO A 764
ChainResidue
ASER427
AALA428
APRO429
AEDO779

site_idAJ1
Number of Residues5
Detailsbinding site for residue PG4 A 765
ChainResidue
AILE17
APRO18
ALEU27
ASER29
AHOH1049

site_idAJ2
Number of Residues1
Detailsbinding site for residue EDO A 766
ChainResidue
AHOH802

site_idAJ3
Number of Residues3
Detailsbinding site for residue EDO A 767
ChainResidue
ATRP356
AARG357
ASER358

site_idAJ4
Number of Residues6
Detailsbinding site for residue PGE A 768
ChainResidue
AALA119
AVAL120
AHIS121
ALEU158
ATRP252
APRO279

site_idAJ5
Number of Residues5
Detailsbinding site for residue EDO A 769
ChainResidue
ALEU423
ASER427
AALA428
AHOH813
AHOH876

site_idAJ6
Number of Residues2
Detailsbinding site for residue EDO A 770
ChainResidue
ALYS211
APEG790

site_idAJ7
Number of Residues9
Detailsbinding site for residue PE8 A 771
ChainResidue
AGLN471
AHIS578
ACYS579
ATRP583
AASP584
ASER585
AASP646
AGLN672
AHOH919

site_idAJ8
Number of Residues6
Detailsbinding site for residue PG4 A 772
ChainResidue
AHIS235
ASER236
AGLU388
AASP389
AARG391
APEG773

site_idAJ9
Number of Residues5
Detailsbinding site for residue PEG A 773
ChainResidue
ATHR243
ACYS244
AGLU388
APG4772
AHOH996

site_idAK1
Number of Residues5
Detailsbinding site for residue EDO A 774
ChainResidue
AARG446
APEG735
APG4753
AHOH885
AHOH913

site_idAK2
Number of Residues3
Detailsbinding site for residue EDO A 775
ChainResidue
ALYS546
AARG628
AHOH1020

site_idAK3
Number of Residues7
Detailsbinding site for residue PEG A 776
ChainResidue
ALYS204
APRO205
ATHR464
AASP465
AGLN551
AHOH827
AHOH887

site_idAK4
Number of Residues8
Detailsbinding site for residue PGE A 777
ChainResidue
AARG179
AARG401
AASP465
ALYS653
ASER656
APEG788
AHOH827
AHOH1021

site_idAK5
Number of Residues8
Detailsbinding site for residue EDO A 778
ChainResidue
ALEU456
AILE457
AGLY497
ATHR498
APGE715
APGE736
APEG746
AHOH834

site_idAK6
Number of Residues4
Detailsbinding site for residue EDO A 779
ChainResidue
AALA430
APRO431
AEDO764
AEDO784

site_idAK7
Number of Residues7
Detailsbinding site for residue EDO A 780
ChainResidue
AARG41
AGLU152
AALA600
AHOH823
AHOH966
AHOH994
AHOH1083

site_idAK8
Number of Residues8
Detailsbinding site for residue PEG A 781
ChainResidue
AGLN55
AHIS570
ASER571
APRO577
AHIS578
AEDO762
AEDO782
AHOH944

site_idAK9
Number of Residues4
Detailsbinding site for residue EDO A 782
ChainResidue
ASER571
ATHR573
AILE576
APEG781

site_idAL1
Number of Residues3
Detailsbinding site for residue EDO A 783
ChainResidue
ALEU88
AMET89
APRO90

site_idAL2
Number of Residues1
Detailsbinding site for residue EDO A 784
ChainResidue
AEDO779

site_idAL3
Number of Residues4
Detailsbinding site for residue EDO A 785
ChainResidue
ASER656
AHOH818
AHOH853
AHOH976

site_idAL4
Number of Residues1
Detailsbinding site for residue PEG A 787
ChainResidue
AASN518

site_idAL5
Number of Residues7
Detailsbinding site for residue PEG A 788
ChainResidue
AARG179
AALA466
AARG556
ALYS653
AEDO749
APGE777
AHOH803

site_idAL6
Number of Residues1
Detailsbinding site for residue PEG A 789
ChainResidue
A1PE721

site_idAL7
Number of Residues6
Detailsbinding site for residue PEG A 790
ChainResidue
AMET91
ALYS211
AALA212
AHIS292
AGLN293
AEDO770

site_idAL8
Number of Residues3
Detailsbinding site for residue EDO A 791
ChainResidue
AMET538
AMET540
AMET542

site_idAL9
Number of Residues3
Detailsbinding site for residue EDO A 792
ChainResidue
AMET89
APRO90
A1PE721

site_idAM1
Number of Residues3
Detailsbinding site for residue EDO A 793
ChainResidue
ASER136
ALYS139
AHOH974

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsCROSSLNK: S-Lysyl-methionine sulfilimine (Met-Lys) (interchain with K-1651) => ECO:0000250
ChainResidueDetails
AMET93

site_idSWS_FT_FI2
Number of Residues2
DetailsCROSSLNK: S-Lysyl-methionine sulfilimine (Lys-Met) (interchain with M-1549) => ECO:0000250
ChainResidueDetails
ALYS660

site_idSWS_FT_FI3
Number of Residues1
DetailsCROSSLNK: S-Lysyl-methionine sulfilimine (Lys-Met) (interchain with M-1533) => ECO:0000250
ChainResidueDetails
ALYS211

site_idSWS_FT_FI4
Number of Residues1
DetailsCROSSLNK: S-Lysyl-methionine sulfilimine (Met-Lys) (interchain with K-1667) => ECO:0000250
ChainResidueDetails
AMET542

220113

PDB entries from 2024-05-22

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