Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6W2D

Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus

Functional Information from GO Data
ChainGOidnamespacecontents
J0005198molecular_functionstructural molecule activity
J0019028cellular_componentviral capsid
J0039622cellular_componentT=16 icosahedral viral capsid
J0042025cellular_componenthost cell nucleus
K0005198molecular_functionstructural molecule activity
K0019028cellular_componentviral capsid
K0039622cellular_componentT=16 icosahedral viral capsid
K0042025cellular_componenthost cell nucleus
N0005198molecular_functionstructural molecule activity
N0019028cellular_componentviral capsid
N0039622cellular_componentT=16 icosahedral viral capsid
N0042025cellular_componenthost cell nucleus
O0005198molecular_functionstructural molecule activity
O0019028cellular_componentviral capsid
O0039622cellular_componentT=16 icosahedral viral capsid
O0042025cellular_componenthost cell nucleus
P0005198molecular_functionstructural molecule activity
P0019028cellular_componentviral capsid
P0039622cellular_componentT=16 icosahedral viral capsid
P0042025cellular_componenthost cell nucleus
Z0005515molecular_functionprotein binding
Z0016032biological_processviral process
Z0019028cellular_componentviral capsid
Z0042025cellular_componenthost cell nucleus
a0005515molecular_functionprotein binding
a0016032biological_processviral process
a0019028cellular_componentviral capsid
a0042025cellular_componenthost cell nucleus
d0005515molecular_functionprotein binding
d0016032biological_processviral process
d0019028cellular_componentviral capsid
d0042025cellular_componenthost cell nucleus
e0005515molecular_functionprotein binding
e0016032biological_processviral process
e0019028cellular_componentviral capsid
e0042025cellular_componenthost cell nucleus
f0003677molecular_functionDNA binding
f0019028cellular_componentviral capsid
f0019069biological_processviral capsid assembly
f0042025cellular_componenthost cell nucleus
h0003677molecular_functionDNA binding
h0019028cellular_componentviral capsid
h0019069biological_processviral capsid assembly
h0042025cellular_componenthost cell nucleus
k0005198molecular_functionstructural molecule activity
k0019028cellular_componentviral capsid
k0042025cellular_componenthost cell nucleus
m0005198molecular_functionstructural molecule activity
m0019028cellular_componentviral capsid
m0042025cellular_componenthost cell nucleus
p0005198molecular_functionstructural molecule activity
p0019028cellular_componentviral capsid
p0042025cellular_componenthost cell nucleus
r0005198molecular_functionstructural molecule activity
r0019028cellular_componentviral capsid
r0042025cellular_componenthost cell nucleus
u0005515molecular_functionprotein binding
u0016032biological_processviral process
u0019028cellular_componentviral capsid
u0042025cellular_componenthost cell nucleus
v0019028cellular_componentviral capsid
v0042025cellular_componenthost cell nucleus
v0044423cellular_componentvirion component
v0051276biological_processchromosome organization
w0019028cellular_componentviral capsid
w0019072biological_processviral genome packaging
w0042025cellular_componenthost cell nucleus
w0043657cellular_componenthost cell
w0046718biological_processsymbiont entry into host cell
w0075732biological_processviral penetration into host nucleus
x0019028cellular_componentviral capsid
x0019072biological_processviral genome packaging
x0042025cellular_componenthost cell nucleus
x0043657cellular_componenthost cell
x0046718biological_processsymbiont entry into host cell
x0075732biological_processviral penetration into host nucleus
y0004843molecular_functioncysteine-type deubiquitinase activity
y0006508biological_processproteolysis
y0008234molecular_functioncysteine-type peptidase activity
y0019033cellular_componentviral tegument
y0030430cellular_componenthost cell cytoplasm
y0039648biological_processsymbiont-mediated perturbation of host ubiquitin-like protein modification
y0042025cellular_componenthost cell nucleus
z0004843molecular_functioncysteine-type deubiquitinase activity
z0006508biological_processproteolysis
z0008234molecular_functioncysteine-type peptidase activity
z0019033cellular_componentviral tegument
z0030430cellular_componenthost cell cytoplasm
z0039648biological_processsymbiont-mediated perturbation of host ubiquitin-like protein modification
z0042025cellular_componenthost cell nucleus
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_04044, ECO:0000269|PubMed:20190741
ChainResidueDetails
yCYS61
zCYS61

site_idSWS_FT_FI2
Number of Residues4
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_04044
ChainResidueDetails
yASP193
yHIS195
zASP193
zHIS195

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Important for catalytic activity => ECO:0000255|HAMAP-Rule:MF_04044
ChainResidueDetails
yGLN48
zGLN48

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon