Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VDT

Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate 4-nitrophenol

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005344molecular_functionoxygen carrier activity
A0015671biological_processoxygen transport
A0019825molecular_functionoxygen binding
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
B0004601molecular_functionperoxidase activity
B0005344molecular_functionoxygen carrier activity
B0015671biological_processoxygen transport
B0019825molecular_functionoxygen binding
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
B0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue FDE A 201
ChainResidue
AASN34
ALEU92
AASN96
APHE97
ANPO203
APHE35
ATYR38
AHIS55
ALEU62
AMET63
AMET86
AGLN88
AHIS89

site_idAC2
Number of Residues4
Detailsbinding site for residue EDO A 202
ChainResidue
ALYS3
AALA7
AARG10
BGLU65

site_idAC3
Number of Residues7
Detailsbinding site for residue NPO A 203
ChainResidue
APHE21
APHE35
ATYR38
AHIS55
ATHR56
AVAL59
AFDE201

site_idAC4
Number of Residues6
Detailsbinding site for residue PEG A 204
ChainResidue
AGLN44
ALEU62
AGLU65
AASP79
ATHR82
BGLN4

site_idAC5
Number of Residues7
Detailsbinding site for residue SO4 A 205
ChainResidue
AGLY1
APHE2
ALYS3
AASP116
AHOH340
BLYS32
BGLY40

site_idAC6
Number of Residues7
Detailsbinding site for residue SO4 A 206
ChainResidue
ALYS32
AVAL39
AGLY40
AHOH307
BGLY1
BPHE2
BLYS3

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO B 201
ChainResidue
AHOH304
BGLN4
BASP5
BTHR8
BSER114
BHOH334

site_idAC8
Number of Residues13
Detailsbinding site for residue FDE B 202
ChainResidue
BASN34
BPHE35
BASN37
BTYR38
BHIS55
BVAL59
BMET63
BMET86
BGLN88
BHIS89
BLEU92
BASN96
BPHE97

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon