| Chain | GOid | namespace | contents |
| A | 0000112 | cellular_component | nucleotide-excision repair factor 3 complex |
| A | 0000439 | cellular_component | transcription factor TFIIH core complex |
| A | 0000717 | biological_process | nucleotide-excision repair, DNA duplex unwinding |
| A | 0001666 | biological_process | response to hypoxia |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003678 | molecular_function | DNA helicase activity |
| A | 0003684 | molecular_function | damaged DNA binding |
| A | 0004386 | molecular_function | helicase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005654 | cellular_component | nucleoplasm |
| A | 0005669 | cellular_component | transcription factor TFIID complex |
| A | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| A | 0006265 | biological_process | DNA topological change |
| A | 0006281 | biological_process | DNA repair |
| A | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| A | 0006289 | biological_process | nucleotide-excision repair |
| A | 0006366 | biological_process | transcription by RNA polymerase II |
| A | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| A | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| A | 0006915 | biological_process | apoptotic process |
| A | 0006979 | biological_process | response to oxidative stress |
| A | 0008104 | biological_process | protein localization |
| A | 0009411 | biological_process | response to UV |
| A | 0009650 | biological_process | UV protection |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0016887 | molecular_function | ATP hydrolysis activity |
| A | 0035315 | biological_process | hair cell differentiation |
| A | 0043065 | biological_process | positive regulation of apoptotic process |
| A | 0043138 | molecular_function | 3'-5' DNA helicase activity |
| A | 0048568 | biological_process | embryonic organ development |
| A | 0097550 | cellular_component | transcription preinitiation complex |
| A | 0140640 | molecular_function | catalytic activity, acting on a nucleic acid |
| A | 1901990 | biological_process | regulation of mitotic cell cycle phase transition |
| A | 1990841 | molecular_function | promoter-specific chromatin binding |
| B | 0000439 | cellular_component | transcription factor TFIIH core complex |
| B | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| B | 0001666 | biological_process | response to hypoxia |
| B | 0001701 | biological_process | in utero embryonic development |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003678 | molecular_function | DNA helicase activity |
| B | 0003684 | molecular_function | damaged DNA binding |
| B | 0004386 | molecular_function | helicase activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0005669 | cellular_component | transcription factor TFIID complex |
| B | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005819 | cellular_component | spindle |
| B | 0005829 | cellular_component | cytosol |
| B | 0005856 | cellular_component | cytoskeleton |
| B | 0006139 | biological_process | nucleobase-containing compound metabolic process |
| B | 0006259 | biological_process | DNA metabolic process |
| B | 0006281 | biological_process | DNA repair |
| B | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| B | 0006289 | biological_process | nucleotide-excision repair |
| B | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| B | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| B | 0006366 | biological_process | transcription by RNA polymerase II |
| B | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| B | 0006915 | biological_process | apoptotic process |
| B | 0006974 | biological_process | DNA damage response |
| B | 0006979 | biological_process | response to oxidative stress |
| B | 0007059 | biological_process | chromosome segregation |
| B | 0008340 | biological_process | determination of adult lifespan |
| B | 0009411 | biological_process | response to UV |
| B | 0009650 | biological_process | UV protection |
| B | 0009791 | biological_process | post-embryonic development |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016818 | molecular_function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
| B | 0016887 | molecular_function | ATP hydrolysis activity |
| B | 0021510 | biological_process | spinal cord development |
| B | 0022405 | biological_process | hair cycle process |
| B | 0030198 | biological_process | extracellular matrix organization |
| B | 0030282 | biological_process | bone mineralization |
| B | 0030674 | molecular_function | protein-macromolecule adaptor activity |
| B | 0032289 | biological_process | central nervous system myelin formation |
| B | 0032508 | biological_process | DNA duplex unwinding |
| B | 0035264 | biological_process | multicellular organism growth |
| B | 0035315 | biological_process | hair cell differentiation |
| B | 0040016 | biological_process | embryonic cleavage |
| B | 0042274 | biological_process | ribosomal small subunit biogenesis |
| B | 0043139 | molecular_function | 5'-3' DNA helicase activity |
| B | 0043249 | biological_process | erythrocyte maturation |
| B | 0043588 | biological_process | skin development |
| B | 0045951 | biological_process | positive regulation of mitotic recombination |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0048009 | biological_process | insulin-like growth factor receptor signaling pathway |
| B | 0048568 | biological_process | embryonic organ development |
| B | 0048820 | biological_process | hair follicle maturation |
| B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| B | 0060218 | biological_process | hematopoietic stem cell differentiation |
| B | 0070516 | cellular_component | CAK-ERCC2 complex |
| B | 0071425 | biological_process | hematopoietic stem cell proliferation |
| B | 0071817 | cellular_component | MMXD complex |
| B | 0072332 | biological_process | intrinsic apoptotic signaling pathway by p53 class mediator |
| B | 1901990 | biological_process | regulation of mitotic cell cycle phase transition |
| C | 0000438 | cellular_component | core TFIIH complex portion of holo TFIIH complex |
| C | 0000439 | cellular_component | transcription factor TFIIH core complex |
| C | 0001671 | molecular_function | ATPase activator activity |
| C | 0003690 | molecular_function | double-stranded DNA binding |
| C | 0005515 | molecular_function | protein binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005654 | cellular_component | nucleoplasm |
| C | 0005669 | cellular_component | transcription factor TFIID complex |
| C | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| C | 0006281 | biological_process | DNA repair |
| C | 0006289 | biological_process | nucleotide-excision repair |
| C | 0006366 | biological_process | transcription by RNA polymerase II |
| C | 0016251 | molecular_function | RNA polymerase II general transcription initiation factor activity |
| C | 0016607 | cellular_component | nuclear speck |
| D | 0000438 | cellular_component | core TFIIH complex portion of holo TFIIH complex |
| D | 0000439 | cellular_component | transcription factor TFIIH core complex |
| D | 0002031 | biological_process | G protein-coupled receptor internalization |
| D | 0005515 | molecular_function | protein binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005654 | cellular_component | nucleoplasm |
| D | 0005669 | cellular_component | transcription factor TFIID complex |
| D | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| D | 0006281 | biological_process | DNA repair |
| D | 0006289 | biological_process | nucleotide-excision repair |
| D | 0006351 | biological_process | DNA-templated transcription |
| D | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| D | 0006366 | biological_process | transcription by RNA polymerase II |
| D | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| D | 0008270 | molecular_function | zinc ion binding |
| D | 0009411 | biological_process | response to UV |
| D | 0016251 | molecular_function | RNA polymerase II general transcription initiation factor activity |
| D | 0016607 | cellular_component | nuclear speck |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0000438 | cellular_component | core TFIIH complex portion of holo TFIIH complex |
| E | 0000439 | cellular_component | transcription factor TFIIH core complex |
| E | 0005515 | molecular_function | protein binding |
| E | 0005634 | cellular_component | nucleus |
| E | 0005654 | cellular_component | nucleoplasm |
| E | 0005669 | cellular_component | transcription factor TFIID complex |
| E | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| E | 0006281 | biological_process | DNA repair |
| E | 0006289 | biological_process | nucleotide-excision repair |
| E | 0006355 | biological_process | regulation of DNA-templated transcription |
| E | 0006366 | biological_process | transcription by RNA polymerase II |
| E | 0016251 | molecular_function | RNA polymerase II general transcription initiation factor activity |
| E | 0046872 | molecular_function | metal ion binding |
| E | 0097550 | cellular_component | transcription preinitiation complex |
| F | 0000439 | cellular_component | transcription factor TFIIH core complex |
| F | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| F | 0005515 | molecular_function | protein binding |
| F | 0005634 | cellular_component | nucleus |
| F | 0005654 | cellular_component | nucleoplasm |
| F | 0005669 | cellular_component | transcription factor TFIID complex |
| F | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| F | 0005730 | cellular_component | nucleolus |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0006281 | biological_process | DNA repair |
| F | 0006289 | biological_process | nucleotide-excision repair |
| F | 0006294 | biological_process | nucleotide-excision repair, preincision complex assembly |
| F | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| F | 0006366 | biological_process | transcription by RNA polymerase II |
| F | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| F | 0071480 | biological_process | cellular response to gamma radiation |
| G | 0000110 | cellular_component | nucleotide-excision repair factor 1 complex |
| G | 0000715 | biological_process | nucleotide-excision repair, DNA damage recognition |
| G | 0003677 | molecular_function | DNA binding |
| G | 0003684 | molecular_function | damaged DNA binding |
| G | 0005515 | molecular_function | protein binding |
| G | 0005634 | cellular_component | nucleus |
| G | 0005654 | cellular_component | nucleoplasm |
| G | 0005662 | cellular_component | DNA replication factor A complex |
| G | 0006281 | biological_process | DNA repair |
| G | 0006284 | biological_process | base-excision repair |
| G | 0006289 | biological_process | nucleotide-excision repair |
| G | 0009650 | biological_process | UV protection |
| G | 0010996 | biological_process | response to auditory stimulus |
| G | 0019904 | molecular_function | protein domain specific binding |
| G | 0034504 | biological_process | protein localization to nucleus |
| G | 0042803 | molecular_function | protein homodimerization activity |
| G | 0045171 | cellular_component | intercellular bridge |
| G | 0046872 | molecular_function | metal ion binding |
| G | 0070914 | biological_process | UV-damage excision repair |
| G | 1901255 | biological_process | nucleotide-excision repair involved in interstrand cross-link repair |
| G | 1990837 | molecular_function | sequence-specific double-stranded DNA binding |
