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6QEA

The X-ray structure of the adduct formed in the reaction between hen egg white lysozyme and complex I, a pentacoordinate Pt(II) compound containing 2,9-dimethyl-1,10-phenanthroline, dimethylfumarate, methyl and iodine as ligands

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue NO3 A 401
ChainResidue
ASER24
ALEU25
AGLY26
AGLN121
AILE124

site_idAC2
Number of Residues7
Detailsbinding site for residue NO3 A 402
ChainResidue
AILE88
AHOH504
AHOH518
AARG14
AHIS15
ASER86
AASP87

site_idAC3
Number of Residues5
Detailsbinding site for residue NO3 A 403
ChainResidue
AASN65
AASN74
AASN77
AILE78
APRO79

site_idAC4
Number of Residues9
Detailsbinding site for residue NO3 A 404
ChainResidue
ACYS64
AASN65
AASP66
AGLY67
AARG68
ATHR69
ASER72
AHOH503
AHOH512

site_idAC5
Number of Residues4
Detailsbinding site for residue J9H A 405
ChainResidue
AARG14
AHIS15
AASN93
AARG128

site_idAC6
Number of Residues7
Detailsbinding site for residue NO3 A 406
ChainResidue
AASN27
ATRP111
AARG114
ALYS116
AGLY117
AHOH505
AHOH517

site_idAC7
Number of Residues5
Detailsbinding site for residue DMS A 407
ChainResidue
AGLN57
AASN59
AALA107
ATRP108
AHOH566

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
ACYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU35
AASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AASP101

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
AGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASN46
AASP48
ASER50
AASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
AASN59

221051

PDB entries from 2024-06-12

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