6PIC
Crystal structure of Marinobacter subterrani acetylpolyamine amidohydrolase (msAPAH) complexed with 6-amino-N-hydroxyhexanamide
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004407 | molecular_function | histone deacetylase activity |
A | 0006338 | biological_process | chromatin remodeling |
A | 0046872 | molecular_function | metal ion binding |
B | 0004407 | molecular_function | histone deacetylase activity |
B | 0006338 | biological_process | chromatin remodeling |
B | 0046872 | molecular_function | metal ion binding |
C | 0004407 | molecular_function | histone deacetylase activity |
C | 0006338 | biological_process | chromatin remodeling |
C | 0046872 | molecular_function | metal ion binding |
D | 0004407 | molecular_function | histone deacetylase activity |
D | 0006338 | biological_process | chromatin remodeling |
D | 0046872 | molecular_function | metal ion binding |
E | 0004407 | molecular_function | histone deacetylase activity |
E | 0006338 | biological_process | chromatin remodeling |
E | 0046872 | molecular_function | metal ion binding |
F | 0004407 | molecular_function | histone deacetylase activity |
F | 0006338 | biological_process | chromatin remodeling |
F | 0046872 | molecular_function | metal ion binding |
G | 0004407 | molecular_function | histone deacetylase activity |
G | 0006338 | biological_process | chromatin remodeling |
G | 0046872 | molecular_function | metal ion binding |
H | 0004407 | molecular_function | histone deacetylase activity |
H | 0006338 | biological_process | chromatin remodeling |
H | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue ZN A 401 |
Chain | Residue |
A | ASP195 |
A | HIS197 |
A | ASP284 |
A | 6XA405 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue K A 402 |
Chain | Residue |
A | ASP193 |
A | ASP195 |
A | HIS197 |
A | SER216 |
A | LEU217 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue K A 403 |
Chain | Residue |
A | PHE206 |
A | ARG209 |
A | VAL212 |
A | TYR243 |
A | HOH506 |
A | HOH510 |
site_id | AC4 |
Number of Residues | 7 |
Details | binding site for residue MG A 404 |
Chain | Residue |
A | LYS83 |
A | ASP104 |
A | ASP106 |
A | HOH502 |
A | HOH576 |
A | HOH582 |
A | HOH591 |
site_id | AC5 |
Number of Residues | 13 |
Details | binding site for residue 6XA A 405 |
Chain | Residue |
A | GLU17 |
A | ASP117 |
A | HIS158 |
A | HIS159 |
A | TYR168 |
A | ASP195 |
A | HIS197 |
A | PHE225 |
A | ASP284 |
A | TYR323 |
A | ZN401 |
A | HOH523 |
C | PHE91 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue ZN B 401 |
Chain | Residue |
B | ASP195 |
B | HIS197 |
B | ASP284 |
B | 6XA405 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue K B 402 |
Chain | Residue |
B | ASP193 |
B | ASP195 |
B | HIS197 |
B | SER216 |
B | LEU217 |
site_id | AC8 |
Number of Residues | 6 |
Details | binding site for residue K B 403 |
Chain | Residue |
B | PHE206 |
B | ARG209 |
B | VAL212 |
B | TYR243 |
B | HOH503 |
B | HOH521 |
site_id | AC9 |
Number of Residues | 6 |
Details | binding site for residue MG B 404 |
Chain | Residue |
B | ASP104 |
B | ASP106 |
B | HOH504 |
B | HOH506 |
B | HOH561 |
B | HOH573 |
site_id | AD1 |
Number of Residues | 13 |
Details | binding site for residue 6XA B 405 |
Chain | Residue |
B | GLU17 |
B | ASP117 |
B | HIS158 |
B | HIS159 |
B | TYR168 |
B | ASP195 |
B | HIS197 |
B | PHE225 |
B | ASP284 |
B | TYR323 |
B | ZN401 |
B | HOH511 |
H | PHE91 |
site_id | AD2 |
Number of Residues | 4 |
Details | binding site for residue ZN C 401 |
Chain | Residue |
C | ASP195 |
C | HIS197 |
C | ASP284 |
C | 6XA405 |
site_id | AD3 |
Number of Residues | 5 |
Details | binding site for residue K C 402 |
Chain | Residue |
C | ASP193 |
C | ASP195 |
C | HIS197 |
C | SER216 |
C | LEU217 |
site_id | AD4 |
Number of Residues | 6 |
Details | binding site for residue K C 403 |
Chain | Residue |
C | PHE206 |
C | ARG209 |
C | VAL212 |
C | TYR243 |
C | HOH513 |
C | HOH525 |
site_id | AD5 |
Number of Residues | 6 |
Details | binding site for residue MG C 404 |
Chain | Residue |
C | ASP104 |
C | ASP106 |
C | HOH510 |
C | HOH561 |
C | HOH567 |
C | HOH578 |
site_id | AD6 |
Number of Residues | 14 |
Details | binding site for residue 6XA C 405 |
Chain | Residue |
C | ASP284 |
C | TYR323 |
C | ZN401 |
C | HOH519 |
C | HOH521 |
A | PHE91 |
C | GLU17 |
C | ASP117 |
C | HIS158 |
C | HIS159 |
C | GLY167 |
C | TYR168 |
C | ASP195 |
C | HIS197 |
site_id | AD7 |
Number of Residues | 4 |
Details | binding site for residue ZN D 401 |
Chain | Residue |
D | ASP195 |
D | HIS197 |
D | ASP284 |
D | 6XA405 |
site_id | AD8 |
Number of Residues | 5 |
Details | binding site for residue K D 402 |
Chain | Residue |
D | ASP193 |
D | ASP195 |
D | HIS197 |
D | SER216 |
D | LEU217 |
site_id | AD9 |
Number of Residues | 6 |
Details | binding site for residue K D 403 |
Chain | Residue |
D | PHE206 |
D | ARG209 |
D | VAL212 |
D | TYR243 |
D | HOH507 |
D | HOH523 |
site_id | AE1 |
Number of Residues | 6 |
Details | binding site for residue MG D 404 |
Chain | Residue |
D | ASP104 |
D | ASP106 |
D | HOH502 |
D | HOH549 |
D | HOH561 |
D | HOH571 |
site_id | AE2 |
Number of Residues | 13 |
Details | binding site for residue 6XA D 405 |
Chain | Residue |
D | GLU17 |
D | ASP117 |
D | HIS158 |
D | HIS159 |
D | TYR168 |
D | ASP195 |
D | HIS197 |
D | ASP284 |
D | TYR323 |
D | ZN401 |
D | HOH501 |
D | HOH562 |
F | PHE91 |
site_id | AE3 |
Number of Residues | 4 |
Details | binding site for residue ZN E 401 |
Chain | Residue |
E | ASP195 |
E | HIS197 |
E | ASP284 |
E | 6XA405 |
site_id | AE4 |
Number of Residues | 5 |
Details | binding site for residue K E 402 |
Chain | Residue |
E | ASP193 |
E | ASP195 |
E | HIS197 |
E | SER216 |
E | LEU217 |
site_id | AE5 |
Number of Residues | 6 |
Details | binding site for residue K E 403 |
Chain | Residue |
E | PHE206 |
E | ARG209 |
E | VAL212 |
E | TYR243 |
E | HOH507 |
E | HOH522 |
site_id | AE6 |
Number of Residues | 7 |
Details | binding site for residue MG E 404 |
Chain | Residue |
E | LYS83 |
E | ASP104 |
E | ASP106 |
E | HOH514 |
E | HOH546 |
E | HOH573 |
E | HOH576 |
site_id | AE7 |
Number of Residues | 13 |
Details | binding site for residue 6XA E 405 |
Chain | Residue |
E | GLU17 |
E | ASP117 |
E | HIS158 |
E | HIS159 |
E | TYR168 |
E | ASP195 |
E | HIS197 |
E | PHE225 |
E | ASP284 |
E | TYR323 |
E | ZN401 |
E | HOH512 |
G | PHE91 |
site_id | AE8 |
Number of Residues | 4 |
Details | binding site for residue ZN F 401 |
Chain | Residue |
F | ASP195 |
F | HIS197 |
F | ASP284 |
F | 6XA405 |
site_id | AE9 |
Number of Residues | 5 |
Details | binding site for residue K F 402 |
Chain | Residue |
F | ASP193 |
F | ASP195 |
F | HIS197 |
F | SER216 |
F | LEU217 |
site_id | AF1 |
Number of Residues | 6 |
Details | binding site for residue K F 403 |
Chain | Residue |
F | PHE206 |
F | ARG209 |
F | VAL212 |
F | TYR243 |
F | HOH519 |
F | HOH536 |
site_id | AF2 |
Number of Residues | 6 |
Details | binding site for residue MG F 404 |
Chain | Residue |
F | ASP104 |
F | ASP106 |
F | HOH505 |
F | HOH565 |
F | HOH579 |
F | HOH584 |
site_id | AF3 |
Number of Residues | 13 |
Details | binding site for residue 6XA F 405 |
Chain | Residue |
D | PHE91 |
F | GLU17 |
F | ASP117 |
F | HIS158 |
F | HIS159 |
F | GLY167 |
F | TYR168 |
F | ASP195 |
F | HIS197 |
F | ASP284 |
F | TYR323 |
F | ZN401 |
F | HOH509 |
site_id | AF4 |
Number of Residues | 4 |
Details | binding site for residue ZN G 401 |
Chain | Residue |
G | ASP195 |
G | HIS197 |
G | ASP284 |
G | 6XA405 |
site_id | AF5 |
Number of Residues | 5 |
Details | binding site for residue K G 402 |
Chain | Residue |
G | ASP193 |
G | ASP195 |
G | HIS197 |
G | SER216 |
G | LEU217 |
site_id | AF6 |
Number of Residues | 6 |
Details | binding site for residue K G 403 |
Chain | Residue |
G | PHE206 |
G | ARG209 |
G | VAL212 |
G | TYR243 |
G | HOH515 |
G | HOH525 |
site_id | AF7 |
Number of Residues | 6 |
Details | binding site for residue MG G 404 |
Chain | Residue |
G | ASP104 |
G | ASP106 |
G | HOH522 |
G | HOH538 |
G | HOH561 |
G | HOH563 |
site_id | AF8 |
Number of Residues | 13 |
Details | binding site for residue 6XA G 405 |
Chain | Residue |
G | GLU17 |
G | ASP117 |
G | HIS158 |
G | HIS159 |
G | GLY167 |
G | TYR168 |
G | ASP195 |
G | HIS197 |
G | PHE225 |
G | ASP284 |
G | TYR323 |
G | ZN401 |
G | HOH518 |
site_id | AF9 |
Number of Residues | 4 |
Details | binding site for residue ZN H 401 |
Chain | Residue |
H | ASP195 |
H | HIS197 |
H | ASP284 |
H | 6XA405 |
site_id | AG1 |
Number of Residues | 5 |
Details | binding site for residue K H 402 |
Chain | Residue |
H | ASP193 |
H | ASP195 |
H | HIS197 |
H | SER216 |
H | LEU217 |
site_id | AG2 |
Number of Residues | 6 |
Details | binding site for residue K H 403 |
Chain | Residue |
H | PHE206 |
H | ARG209 |
H | VAL212 |
H | TYR243 |
H | HOH509 |
H | HOH515 |
site_id | AG3 |
Number of Residues | 6 |
Details | binding site for residue MG H 404 |
Chain | Residue |
H | ASP104 |
H | ASP106 |
H | HOH525 |
H | HOH561 |
H | HOH566 |
H | HOH567 |
site_id | AG4 |
Number of Residues | 13 |
Details | binding site for residue 6XA H 405 |
Chain | Residue |
B | PHE91 |
H | GLU17 |
H | ASP117 |
H | HIS158 |
H | HIS159 |
H | TYR168 |
H | ASP195 |
H | HIS197 |
H | PHE225 |
H | ASP284 |
H | TYR323 |
H | ZN401 |
H | HOH502 |