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6P1I

Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and dCTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
A0006278biological_processRNA-templated DNA biosynthetic process
B0003964molecular_functionRNA-directed DNA polymerase activity
B0006278biological_processRNA-templated DNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SO4 A 601
ChainResidue
AARG206
AGLY436
AASN460
AARG461
BALA288

site_idAC2
Number of Residues13
Detailsbinding site for residue DCP A 602
ChainResidue
AASP113
AALA114
AGLN151
AASP185
ALYS220
AMG603
AHOH702
PDDG822
TDG705
AARG72
AASP110
AVAL111
AGLY112

site_idAC3
Number of Residues4
Detailsbinding site for residue MG A 603
ChainResidue
AASP110
AVAL111
AASP185
ADCP602

site_idAC4
Number of Residues4
Detailsbinding site for residue MG A 604
ChainResidue
AASP443
AGLY444
AGLU478
AASP498

site_idAC5
Number of Residues2
Detailsbinding site for residue SO4 T 801
ChainResidue
TDG707
TDG708

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
BASP110
BASP185
BASP186

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
BTRP401
BTRP414

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Cleavage; by viral protease; partial => ECO:0000250
ChainResidueDetails
BPHE440
AASP549

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
ATRP414
ATRP401

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Cleavage; by viral protease; partial => ECO:0000250
ChainResidueDetails
APHE440

site_idSWS_FT_FI6
Number of Residues1
DetailsSITE: Cleavage; by viral protease => ECO:0000250
ChainResidueDetails
ALEU560

Catalytic Information from CSA
site_idMCSA1
Number of Residues
DetailsM-CSA 175
ChainResidueDetails

219869

PDB entries from 2024-05-15

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