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6GL4

Structure of GluA2o ligand-binding domain (S1S2J) in complex with glutamate and sodium bromide at 1.95 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue GLU A 301
ChainResidue
ATYR61
AHOH453
AHOH457
AHOH498
APRO89
ALEU90
ATHR91
AARG96
AGLY141
ASER142
ATHR143
AGLU193

site_idAC2
Number of Residues1
Detailsbinding site for residue BR A 302
ChainResidue
AHOH465

site_idAC3
Number of Residues3
Detailsbinding site for residue BR A 303
ChainResidue
ATHR93
AVAL95
AHOH574

site_idAC4
Number of Residues3
Detailsbinding site for residue GOL A 305
ChainResidue
ASER217
ALYS218
AHOH441

site_idAC5
Number of Residues11
Detailsbinding site for residue GLU B 301
ChainResidue
BTYR61
BPRO89
BLEU90
BTHR91
BARG96
BGLY141
BSER142
BTHR143
BGLU193
BHOH413
BHOH476

site_idAC6
Number of Residues3
Detailsbinding site for residue BR B 303
ChainResidue
BTHR93
BHOH471
BHOH608

site_idAC7
Number of Residues2
Detailsbinding site for residue BR B 304
ChainResidue
BSER108
BHOH489

site_idAC8
Number of Residues5
Detailsbinding site for residue NA B 305
ChainResidue
BARG182
BILE200
BARG203
BPRO205
BHOH484

site_idAC9
Number of Residues4
Detailsbinding site for residue NA B 306
ChainResidue
BASN242
BHOH424
BHOH499
BHOH573

site_idAD1
Number of Residues5
Detailsbinding site for residue ACT B 307
ChainResidue
BASN214
BLEU215
BASP216
BSER217
BHOH508

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:16483599
ChainResidueDetails
AGLU193
BTYR61
BARG96
BGLU193
ATYR61
AARG96

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING:
ChainResidueDetails
APRO89
BPRO89

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:25103405
ChainResidueDetails
BSER142
BTHR143
ATHR91
ASER142
ATHR143
BTHR91

site_idSWS_FT_FI4
Number of Residues6
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
AARG64
AARG148
ALYS240
BARG64
BARG148
BLYS240

site_idSWS_FT_FI5
Number of Residues2
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
AILE121
BILE121

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER150
BSER150

site_idSWS_FT_FI7
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER184
BSER184

site_idSWS_FT_FI8
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN3
BASN3

220472

PDB entries from 2024-05-29

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