Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003964 | molecular_function | RNA-directed DNA polymerase activity |
A | 0004523 | molecular_function | RNA-DNA hybrid ribonuclease activity |
A | 0006278 | biological_process | RNA-templated DNA biosynthetic process |
B | 0003964 | molecular_function | RNA-directed DNA polymerase activity |
B | 0006278 | biological_process | RNA-templated DNA biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 18 |
Details | binding site for residue K5A A 601 |
Chain | Residue |
A | PRO95 |
A | PHE227 |
A | TRP229 |
A | LEU234 |
A | HIS235 |
A | TYR318 |
A | HOH849 |
A | HOH936 |
B | GLU138 |
B | HOH680 |
A | LEU100 |
A | LYS101 |
A | LYS103 |
A | LYS104 |
A | VAL106 |
A | VAL179 |
A | TYR181 |
A | TYR188 |
site_id | AC2 |
Number of Residues | 7 |
Details | binding site for residue MG A 602 |
Chain | Residue |
A | ASP443 |
A | ASP498 |
A | ASP549 |
A | HOH717 |
A | HOH830 |
A | HOH942 |
A | HOH954 |
site_id | AC3 |
Number of Residues | 7 |
Details | binding site for residue SO4 A 603 |
Chain | Residue |
A | MET41 |
A | LYS73 |
A | TYR146 |
A | PRO150 |
A | GLN151 |
A | HOH754 |
A | HOH879 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 604 |
Chain | Residue |
A | LYS331 |
A | GLY333 |
A | GLN334 |
A | LYS512 |
A | HOH857 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue SO4 A 605 |
Chain | Residue |
A | SER515 |
A | GLU516 |
A | LEU517 |
A | HOH704 |
site_id | AC6 |
Number of Residues | 6 |
Details | binding site for residue EDO A 606 |
Chain | Residue |
A | LEU425 |
A | TRP426 |
A | TYR427 |
A | GLN509 |
A | ASP511 |
A | HOH845 |
site_id | AC7 |
Number of Residues | 6 |
Details | binding site for residue EDO A 607 |
Chain | Residue |
A | LEU486 |
A | SER489 |
A | LEU491 |
A | GLN524 |
A | LYS528 |
A | HOH957 |
site_id | AC8 |
Number of Residues | 6 |
Details | binding site for residue EDO A 608 |
Chain | Residue |
A | TRP88 |
A | HOH710 |
A | HOH859 |
B | VAL21 |
B | LYS22 |
B | HOH701 |
site_id | AC9 |
Number of Residues | 7 |
Details | binding site for residue EDO A 609 |
Chain | Residue |
A | GLN161 |
A | ILE180 |
A | TYR181 |
A | GLN182 |
B | GLU138 |
B | THR139 |
B | HOH771 |
site_id | AD1 |
Number of Residues | 5 |
Details | binding site for residue EDO A 610 |
Chain | Residue |
A | ARG448 |
A | THR473 |
A | ASN474 |
A | GLN475 |
A | HOH883 |
site_id | AD2 |
Number of Residues | 5 |
Details | binding site for residue EDO A 611 |
Chain | Residue |
A | GLU6 |
A | HOH874 |
B | LYS49 |
B | ILE50 |
B | GLY51 |
site_id | AD3 |
Number of Residues | 1 |
Details | binding site for residue EDO A 612 |
site_id | AD4 |
Number of Residues | 3 |
Details | binding site for residue EDO A 613 |
Chain | Residue |
A | GLU396 |
A | GLU399 |
A | THR400 |
site_id | AD5 |
Number of Residues | 5 |
Details | binding site for residue EDO A 614 |
Chain | Residue |
A | ARG463 |
A | ASP488 |
A | SER489 |
A | GLY490 |
A | HOH915 |
site_id | AD6 |
Number of Residues | 4 |
Details | binding site for residue EDO A 615 |
Chain | Residue |
A | ARG277 |
A | ARG356 |
A | MET357 |
A | ARG358 |
site_id | AD7 |
Number of Residues | 4 |
Details | binding site for residue EDO A 616 |
Chain | Residue |
A | ARG277 |
A | GLN334 |
A | ARG356 |
A | LYS512 |
site_id | AD8 |
Number of Residues | 6 |
Details | binding site for residue EDO A 617 |
Chain | Residue |
A | TYR532 |
A | LEU533 |
A | HOH714 |
A | HOH731 |
A | HOH762 |
A | HOH953 |
site_id | AD9 |
Number of Residues | 6 |
Details | binding site for residue EDO A 618 |
Chain | Residue |
A | ASN136 |
A | ASN137 |
A | HOH715 |
B | GLU328 |
B | PHE346 |
B | LYS390 |
site_id | AE1 |
Number of Residues | 4 |
Details | binding site for residue SO4 B 501 |
Chain | Residue |
A | GLN85 |
B | GLU53 |
B | PRO55 |
B | TYR56 |
site_id | AE2 |
Number of Residues | 9 |
Details | binding site for residue SO4 B 502 |
Chain | Residue |
A | THR403 |
A | GLU404 |
A | TYR405 |
A | TRP406 |
B | LYS331 |
B | GLN332 |
B | LYS424 |
B | HOH695 |
B | HOH791 |
site_id | AE3 |
Number of Residues | 4 |
Details | binding site for residue SO4 B 503 |
Chain | Residue |
B | LYS275 |
B | VAL276 |
B | ARG277 |
B | HOH784 |
site_id | AE4 |
Number of Residues | 5 |
Details | binding site for residue SO4 B 504 |
Chain | Residue |
B | LEU234 |
B | HIS235 |
B | TRP239 |
B | EDO509 |
B | HOH810 |
site_id | AE5 |
Number of Residues | 5 |
Details | binding site for residue EDO B 505 |
Chain | Residue |
B | TRP24 |
B | GLU399 |
B | TRP402 |
B | HOH610 |
B | HOH621 |
site_id | AE6 |
Number of Residues | 9 |
Details | binding site for residue EDO B 506 |
Chain | Residue |
B | VAL75 |
B | PHE77 |
B | ASN81 |
B | GLY152 |
B | TRP410 |
B | ILE411 |
B | HOH612 |
B | HOH699 |
B | HOH793 |
site_id | AE7 |
Number of Residues | 5 |
Details | binding site for residue EDO B 507 |
Chain | Residue |
A | SER162 |
B | ILE50 |
B | GLY51 |
B | PRO52 |
B | HOH664 |
site_id | AE8 |
Number of Residues | 5 |
Details | binding site for residue EDO B 508 |
Chain | Residue |
B | VAL108 |
B | ASP186 |
B | HOH620 |
B | HOH685 |
B | HOH773 |
site_id | AE9 |
Number of Residues | 5 |
Details | binding site for residue EDO B 509 |
Chain | Residue |
B | TYR232 |
B | LYS374 |
B | GLU378 |
B | SO4504 |
B | HOH766 |
site_id | AF1 |
Number of Residues | 7 |
Details | binding site for residue EDO B 510 |
Chain | Residue |
A | ILE380 |
A | HOH907 |
B | THR27 |
B | THR400 |
B | TRP401 |
B | GLU404 |
B | HOH662 |
site_id | AF2 |
Number of Residues | 4 |
Details | binding site for residue EDO B 511 |
Chain | Residue |
B | PRO157 |
B | TYR183 |
B | MET184 |
B | HOH743 |
site_id | AF3 |
Number of Residues | 4 |
Details | binding site for residue EDO B 512 |
Chain | Residue |
A | GLU138 |
B | TRP426 |
B | HOH668 |
B | HOH712 |
site_id | AF4 |
Number of Residues | 7 |
Details | binding site for residue EDO B 513 |
Chain | Residue |
A | GLU432 |
A | PRO433 |
A | HOH904 |
B | THR253 |
B | ASN255 |
B | ASP256 |
B | HOH631 |
site_id | AF5 |
Number of Residues | 5 |
Details | binding site for residue EDO B 514 |
Chain | Residue |
A | HOH871 |
B | GLU28 |
B | ILE135 |
B | HOH637 |
B | HOH804 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 3 |
Details | BINDING: |
Chain | Residue | Details |
B | ASP110 | |
B | ASP185 | |
B | ASP186 | |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | SITE: Essential for RT p66/p51 heterodimerization |
Chain | Residue | Details |
B | TRP401 | |
B | TRP414 | |
A | ASP498 | |
A | ASP549 | |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | SITE: Essential for RT p66/p51 heterodimerization |
Chain | Residue | Details |
A | TRP401 | |
A | TRP414 | |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | SITE: Cleavage; by viral protease; partial |
Chain | Residue | Details |
A | PHE440 | |