5YB6
L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-lysine complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0001716 | molecular_function | L-amino-acid oxidase activity |
| A | 0004497 | molecular_function | monooxygenase activity |
| A | 0009063 | biological_process | amino acid catabolic process |
| A | 0009851 | biological_process | auxin biosynthetic process |
| A | 0016491 | molecular_function | oxidoreductase activity |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0001716 | molecular_function | L-amino-acid oxidase activity |
| B | 0004497 | molecular_function | monooxygenase activity |
| B | 0009063 | biological_process | amino acid catabolic process |
| B | 0009851 | biological_process | auxin biosynthetic process |
| B | 0016491 | molecular_function | oxidoreductase activity |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0001716 | molecular_function | L-amino-acid oxidase activity |
| C | 0004497 | molecular_function | monooxygenase activity |
| C | 0009063 | biological_process | amino acid catabolic process |
| C | 0009851 | biological_process | auxin biosynthetic process |
| C | 0016491 | molecular_function | oxidoreductase activity |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0001716 | molecular_function | L-amino-acid oxidase activity |
| D | 0004497 | molecular_function | monooxygenase activity |
| D | 0009063 | biological_process | amino acid catabolic process |
| D | 0009851 | biological_process | auxin biosynthetic process |
| D | 0016491 | molecular_function | oxidoreductase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 40 |
| Details | binding site for residue FAD A 601 |
| Chain | Residue |
| A | VAL51 |
| A | ARG82 |
| A | LEU83 |
| A | GLY99 |
| A | GLY100 |
| A | MET101 |
| A | ARG102 |
| A | PHE103 |
| A | VAL301 |
| A | THR330 |
| A | LEU335 |
| A | GLY52 |
| A | ILE340 |
| A | SER363 |
| A | TYR416 |
| A | TRP463 |
| A | HIS468 |
| A | PHE469 |
| A | ALA472 |
| A | PHE473 |
| A | GLY507 |
| A | ASP508 |
| A | GLY54 |
| A | ALA515 |
| A | TRP516 |
| A | VAL517 |
| A | ALA520 |
| A | HOH724 |
| A | HOH773 |
| A | HOH811 |
| A | HOH823 |
| A | HOH853 |
| A | HOH866 |
| A | ILE55 |
| A | HOH873 |
| A | ALA56 |
| A | GLU75 |
| A | ALA76 |
| A | LYS78 |
| A | GLY81 |
| site_id | AC2 |
| Number of Residues | 10 |
| Details | binding site for residue PG6 A 602 |
| Chain | Residue |
| A | LEU139 |
| A | GLU140 |
| A | GLN142 |
| A | TYR144 |
| A | GLN220 |
| A | HOH716 |
| A | HOH803 |
| A | HOH903 |
| C | LYS350 |
| C | ASP560 |
| site_id | AC3 |
| Number of Residues | 12 |
| Details | binding site for residue LYS A 603 |
| Chain | Residue |
| A | ARG102 |
| A | TRP235 |
| A | ASP238 |
| A | MET361 |
| A | TYR416 |
| A | TRP418 |
| A | PHE473 |
| A | ALA515 |
| A | TRP516 |
| A | HOH815 |
| A | HOH820 |
| A | HOH846 |
| site_id | AC4 |
| Number of Residues | 14 |
| Details | binding site for residue LYS A 604 |
| Chain | Residue |
| A | THR337 |
| A | GLN349 |
| A | TRP352 |
| A | ASP356 |
| A | HOH735 |
| A | HOH799 |
| C | GLU140 |
| C | GLY141 |
| C | ASP393 |
| C | ARG394 |
| C | LEU395 |
| C | HOH737 |
| C | HOH809 |
| C | HOH874 |
| site_id | AC5 |
| Number of Residues | 41 |
| Details | binding site for residue FAD B 601 |
| Chain | Residue |
| B | HIS468 |
| B | PHE469 |
| B | ALA472 |
| B | PHE473 |
| B | GLY507 |
| B | ASP508 |
| B | ALA515 |
| B | TRP516 |
| B | VAL517 |
| B | ALA520 |
| B | LYS603 |
| B | HOH749 |
| B | HOH787 |
| B | HOH813 |
| B | HOH823 |
| B | HOH829 |
| B | HOH857 |
| B | HOH877 |
| B | VAL51 |
| B | GLY52 |
| B | GLY54 |
| B | ILE55 |
| B | ALA56 |
| B | GLU75 |
| B | ALA76 |
| B | LYS78 |
| B | GLY81 |
| B | ARG82 |
| B | LEU83 |
| B | GLY99 |
| B | GLY100 |
| B | MET101 |
| B | ARG102 |
| B | PHE103 |
| B | GLY300 |
| B | VAL301 |
| B | THR330 |
| B | ILE340 |
| B | SER363 |
| B | TYR416 |
| B | TRP463 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | binding site for residue PG6 B 602 |
| Chain | Residue |
| B | GLU140 |
| B | GLN142 |
| B | TYR144 |
| B | GLN220 |
| B | HOH863 |
| B | HOH953 |
| D | LYS350 |
| D | ASP560 |
| site_id | AC7 |
| Number of Residues | 13 |
| Details | binding site for residue LYS B 603 |
| Chain | Residue |
| B | ARG102 |
| B | TRP235 |
| B | ASP238 |
| B | MET361 |
| B | TYR416 |
| B | TRP418 |
| B | PHE473 |
| B | ALA515 |
| B | TRP516 |
| B | FAD601 |
| B | HOH735 |
| B | HOH834 |
| B | HOH898 |
| site_id | AC8 |
| Number of Residues | 14 |
| Details | binding site for residue LYS B 604 |
| Chain | Residue |
| B | THR337 |
| B | GLU344 |
| B | GLN349 |
| B | TRP352 |
| B | ASP356 |
| B | HOH724 |
| B | HOH844 |
| D | GLY141 |
| D | ASP393 |
| D | ARG394 |
| D | LEU395 |
| D | HOH790 |
| D | HOH810 |
| D | HOH862 |
| site_id | AC9 |
| Number of Residues | 37 |
| Details | binding site for residue FAD C 601 |
| Chain | Residue |
| C | VAL51 |
| C | GLY52 |
| C | ILE55 |
| C | ALA56 |
| C | GLU75 |
| C | ALA76 |
| C | LYS78 |
| C | GLY81 |
| C | ARG82 |
| C | LEU83 |
| C | GLY99 |
| C | GLY100 |
| C | MET101 |
| C | ARG102 |
| C | PHE103 |
| C | VAL301 |
| C | THR330 |
| C | CYS331 |
| C | ILE340 |
| C | SER363 |
| C | TYR416 |
| C | HIS468 |
| C | PHE469 |
| C | ALA472 |
| C | PHE473 |
| C | GLY507 |
| C | ASP508 |
| C | ALA515 |
| C | TRP516 |
| C | VAL517 |
| C | ALA520 |
| C | LYS603 |
| C | HOH719 |
| C | HOH744 |
| C | HOH813 |
| C | HOH836 |
| C | HOH841 |
| site_id | AD1 |
| Number of Residues | 9 |
| Details | binding site for residue PG6 C 602 |
| Chain | Residue |
| A | LYS350 |
| A | ASP560 |
| C | LEU139 |
| C | GLU140 |
| C | GLN142 |
| C | TYR144 |
| C | GLN220 |
| C | HOH799 |
| C | HOH887 |
| site_id | AD2 |
| Number of Residues | 10 |
| Details | binding site for residue LYS C 603 |
| Chain | Residue |
| C | ARG102 |
| C | ASP238 |
| C | TYR416 |
| C | TRP418 |
| C | ALA515 |
| C | TRP516 |
| C | FAD601 |
| C | HOH736 |
| C | HOH832 |
| C | HOH877 |
| site_id | AD3 |
| Number of Residues | 15 |
| Details | binding site for residue LYS C 604 |
| Chain | Residue |
| A | GLU140 |
| A | GLY141 |
| A | ASP393 |
| A | ARG394 |
| A | LEU395 |
| A | HOH705 |
| A | HOH742 |
| A | HOH806 |
| C | THR337 |
| C | GLN349 |
| C | TRP352 |
| C | ASP356 |
| C | HOH730 |
| C | HOH739 |
| C | HOH891 |
| site_id | AD4 |
| Number of Residues | 37 |
| Details | binding site for residue FAD D 601 |
| Chain | Residue |
| D | VAL51 |
| D | GLY52 |
| D | GLY54 |
| D | ILE55 |
| D | ALA56 |
| D | GLU75 |
| D | ALA76 |
| D | LYS78 |
| D | GLY81 |
| D | ARG82 |
| D | LEU83 |
| D | GLY99 |
| D | GLY100 |
| D | MET101 |
| D | ARG102 |
| D | PHE103 |
| D | VAL301 |
| D | THR330 |
| D | CYS331 |
| D | ILE340 |
| D | SER363 |
| D | TYR416 |
| D | HIS468 |
| D | PHE469 |
| D | ALA472 |
| D | PHE473 |
| D | GLY507 |
| D | ASP508 |
| D | ALA515 |
| D | TRP516 |
| D | VAL517 |
| D | ALA520 |
| D | LYS603 |
| D | HOH703 |
| D | HOH749 |
| D | HOH836 |
| D | HOH873 |
| site_id | AD5 |
| Number of Residues | 6 |
| Details | binding site for residue PG6 D 602 |
| Chain | Residue |
| B | LYS350 |
| B | ASP560 |
| D | GLU140 |
| D | GLN142 |
| D | TYR144 |
| D | GLN220 |
| site_id | AD6 |
| Number of Residues | 10 |
| Details | binding site for residue LYS D 603 |
| Chain | Residue |
| D | ARG102 |
| D | ASP238 |
| D | TYR416 |
| D | TRP418 |
| D | PHE473 |
| D | ALA515 |
| D | TRP516 |
| D | FAD601 |
| D | HOH837 |
| D | HOH902 |
| site_id | AD7 |
| Number of Residues | 16 |
| Details | binding site for residue LYS D 604 |
| Chain | Residue |
| B | GLU140 |
| B | GLY141 |
| B | ASP393 |
| B | ARG394 |
| B | LEU395 |
| B | HOH728 |
| B | HOH741 |
| B | HOH753 |
| D | THR337 |
| D | GLU344 |
| D | GLN349 |
| D | TRP352 |
| D | ASP356 |
| D | HOH728 |
| D | HOH767 |
| D | HOH925 |
