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5Y2T

Structure of PPARgamma ligand binding domain - lobeglitazone complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue 8LX A 501
ChainResidue
AGLY258
AMET364
AHIS449
ATYR473
AHOH637
AHOH681
AHOH739
APHE282
AGLY284
ACYS285
ASER289
AHIS323
ATYR327
AILE341
AMET348

site_idAC2
Number of Residues18
Detailsbinding site for residue 8LX B 501
ChainResidue
BLEU255
BGLU259
BPHE264
BHIS266
BARG280
BILE281
BPHE282
BCYS285
BGLN286
BSER289
BHIS323
BTYR327
BILE341
BMET348
BPHE363
BMET364
BHIS449
BLEU453

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
ChainResidueDetails
AGLN286
AHIS323
AHIS449
ATYR473
BGLN286
BHIS323
BHIS449
BTYR473

site_idSWS_FT_FI2
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
ChainResidueDetails
ALYS224
BLYS224

218853

PDB entries from 2024-04-24

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