5XB7
GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004565 | molecular_function | beta-galactosidase activity |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0009341 | cellular_component | beta-galactosidase complex |
B | 0004565 | molecular_function | beta-galactosidase activity |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0009341 | cellular_component | beta-galactosidase complex |
C | 0004565 | molecular_function | beta-galactosidase activity |
C | 0005975 | biological_process | carbohydrate metabolic process |
C | 0009341 | cellular_component | beta-galactosidase complex |
D | 0004565 | molecular_function | beta-galactosidase activity |
D | 0005975 | biological_process | carbohydrate metabolic process |
D | 0009341 | cellular_component | beta-galactosidase complex |
E | 0004565 | molecular_function | beta-galactosidase activity |
E | 0005975 | biological_process | carbohydrate metabolic process |
E | 0009341 | cellular_component | beta-galactosidase complex |
F | 0004565 | molecular_function | beta-galactosidase activity |
F | 0005975 | biological_process | carbohydrate metabolic process |
F | 0009341 | cellular_component | beta-galactosidase complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue SO4 A 801 |
Chain | Residue |
A | GLY424 |
A | GLY425 |
A | ARG528 |
A | HOH988 |
site_id | AC2 |
Number of Residues | 11 |
Details | binding site for residue GOL A 802 |
Chain | Residue |
A | ASP278 |
A | GLU311 |
A | TRP345 |
A | GLU355 |
A | HOH964 |
A | HOH1091 |
A | TYR85 |
A | ARG112 |
A | ASN150 |
A | GLU151 |
A | ASN247 |
site_id | AC3 |
Number of Residues | 10 |
Details | binding site for residue GOL A 803 |
Chain | Residue |
A | PHE441 |
A | GLU442 |
A | ASN444 |
A | LEU620 |
A | ALA621 |
A | GLY622 |
A | VAL624 |
A | CYS625 |
A | HOH983 |
A | HOH1164 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue GOL A 804 |
Chain | Residue |
A | ARG112 |
A | GLU151 |
A | TRP358 |
site_id | AC5 |
Number of Residues | 2 |
Details | binding site for residue GOL A 805 |
Chain | Residue |
A | HIS160 |
A | HOH986 |
site_id | AC6 |
Number of Residues | 2 |
Details | binding site for residue GOL A 806 |
Chain | Residue |
A | ARG380 |
A | HOH972 |
site_id | AC7 |
Number of Residues | 3 |
Details | binding site for residue GOL A 807 |
Chain | Residue |
A | GLY205 |
A | ARG212 |
A | GOL808 |
site_id | AC8 |
Number of Residues | 2 |
Details | binding site for residue GOL A 808 |
Chain | Residue |
A | GOL807 |
D | PHE354 |
site_id | AC9 |
Number of Residues | 3 |
Details | binding site for residue GOL A 809 |
Chain | Residue |
C | ILE207 |
C | MET423 |
C | GOL808 |
site_id | AD1 |
Number of Residues | 4 |
Details | binding site for residue SO4 A 810 |
Chain | Residue |
A | ALA597 |
A | ARG601 |
A | HOH1002 |
A | HOH1236 |
site_id | AD2 |
Number of Residues | 4 |
Details | binding site for residue SO4 B 801 |
Chain | Residue |
B | GLY424 |
B | GLY425 |
B | ARG528 |
B | HOH1081 |
site_id | AD3 |
Number of Residues | 6 |
Details | binding site for residue SO4 B 802 |
Chain | Residue |
B | ARG171 |
B | ASN176 |
B | TRP197 |
D | ARG171 |
D | ASN176 |
D | TRP197 |
site_id | AD4 |
Number of Residues | 2 |
Details | binding site for residue SO4 B 803 |
Chain | Residue |
B | ARG601 |
B | HOH902 |
site_id | AD5 |
Number of Residues | 11 |
Details | binding site for residue GOL B 804 |
Chain | Residue |
B | TYR85 |
B | ARG112 |
B | ASN150 |
B | GLU151 |
B | ASN247 |
B | ASP278 |
B | GLU311 |
B | TRP345 |
B | GLU355 |
B | HOH973 |
B | HOH1029 |
site_id | AD6 |
Number of Residues | 8 |
Details | binding site for residue GOL B 805 |
Chain | Residue |
B | GLU442 |
B | ASN444 |
B | LEU620 |
B | ALA621 |
B | GLY622 |
B | VAL624 |
B | HOH945 |
B | HOH983 |
site_id | AD7 |
Number of Residues | 5 |
Details | binding site for residue GOL B 806 |
Chain | Residue |
B | LYS153 |
B | TYR154 |
B | TYR155 |
B | ASP156 |
B | ALA262 |
site_id | AD8 |
Number of Residues | 5 |
Details | binding site for residue GOL B 807 |
Chain | Residue |
B | HIS562 |
B | ARG580 |
B | ALA582 |
B | ASP587 |
B | HOH1178 |
site_id | AD9 |
Number of Residues | 2 |
Details | binding site for residue GOL B 808 |
Chain | Residue |
B | PHE354 |
F | MET423 |
site_id | AE1 |
Number of Residues | 3 |
Details | binding site for residue GOL B 809 |
Chain | Residue |
B | ARG239 |
B | ASP240 |
B | ASP241 |
site_id | AE2 |
Number of Residues | 5 |
Details | binding site for residue GOL B 810 |
Chain | Residue |
B | ARG112 |
B | GLU151 |
B | TRP358 |
B | HOH904 |
B | HOH1030 |
site_id | AE3 |
Number of Residues | 1 |
Details | binding site for residue GOL B 811 |
Chain | Residue |
B | ILE274 |
site_id | AE4 |
Number of Residues | 5 |
Details | binding site for residue GOL B 812 |
Chain | Residue |
B | VAL445 |
B | GLU446 |
B | ASN398 |
B | ALA399 |
B | VAL400 |
site_id | AE5 |
Number of Residues | 7 |
Details | binding site for residue GOL B 813 |
Chain | Residue |
B | ASP97 |
B | THR101 |
B | SER159 |
B | HIS160 |
B | HOH930 |
B | HOH1020 |
B | HOH1038 |
site_id | AE6 |
Number of Residues | 3 |
Details | binding site for residue GOL B 814 |
Chain | Residue |
B | GLY205 |
B | SER206 |
B | ARG212 |
site_id | AE7 |
Number of Residues | 5 |
Details | binding site for residue GOL B 815 |
Chain | Residue |
B | LYS396 |
B | ARG397 |
B | ASN398 |
B | ASP448 |
B | HOH977 |
site_id | AE8 |
Number of Residues | 4 |
Details | binding site for residue SO4 B 816 |
Chain | Residue |
A | ARG651 |
B | ASP681 |
B | ALA682 |
B | HOH1027 |
site_id | AE9 |
Number of Residues | 3 |
Details | binding site for residue SO4 C 801 |
Chain | Residue |
C | GLY424 |
C | GLY425 |
C | ARG528 |
site_id | AF1 |
Number of Residues | 3 |
Details | binding site for residue SO4 C 802 |
Chain | Residue |
C | ASP598 |
C | ARG601 |
C | HOH1074 |
site_id | AF2 |
Number of Residues | 13 |
Details | binding site for residue GOL C 803 |
Chain | Residue |
C | TYR85 |
C | ARG112 |
C | ASN150 |
C | GLU151 |
C | ASN247 |
C | ASP278 |
C | GLU311 |
C | TRP345 |
C | GLU355 |
C | GOL806 |
C | HOH979 |
C | HOH995 |
C | HOH1041 |
site_id | AF3 |
Number of Residues | 7 |
Details | binding site for residue GOL C 804 |
Chain | Residue |
A | GLU106 |
A | HIS108 |
C | THR102 |
C | GLY105 |
C | ASP202 |
C | THR204 |
C | HOH923 |
site_id | AF4 |
Number of Residues | 2 |
Details | binding site for residue GOL C 805 |
Chain | Residue |
C | HIS160 |
C | HOH1023 |
site_id | AF5 |
Number of Residues | 7 |
Details | binding site for residue GOL C 806 |
Chain | Residue |
C | ARG112 |
C | GLU151 |
C | ASP249 |
C | TRP252 |
C | TYR280 |
C | GOL803 |
C | HOH982 |
site_id | AF6 |
Number of Residues | 7 |
Details | binding site for residue GOL C 807 |
Chain | Residue |
C | ASP97 |
C | THR101 |
C | SER159 |
C | HIS160 |
C | HOH923 |
C | HOH967 |
C | HOH1083 |
site_id | AF7 |
Number of Residues | 4 |
Details | binding site for residue GOL C 808 |
Chain | Residue |
A | GOL809 |
C | GLY205 |
C | SER206 |
C | ILE207 |
site_id | AF8 |
Number of Residues | 10 |
Details | binding site for residue GOL C 809 |
Chain | Residue |
C | PHE441 |
C | GLU442 |
C | ASN444 |
C | LEU620 |
C | ALA621 |
C | GLY622 |
C | VAL624 |
C | CYS625 |
C | GOL810 |
C | HOH1123 |
site_id | AF9 |
Number of Residues | 7 |
Details | binding site for residue GOL C 810 |
Chain | Residue |
C | THR623 |
C | CYS625 |
C | LEU641 |
C | ASN642 |
C | TYR643 |
C | SER644 |
C | GOL809 |
site_id | AG1 |
Number of Residues | 1 |
Details | binding site for residue GOL C 811 |
Chain | Residue |
C | ARG380 |
site_id | AG2 |
Number of Residues | 3 |
Details | binding site for residue SO4 D 801 |
Chain | Residue |
D | GLY424 |
D | GLY425 |
D | ARG528 |
site_id | AG3 |
Number of Residues | 3 |
Details | binding site for residue SO4 D 802 |
Chain | Residue |
D | ALA597 |
D | ARG601 |
D | HOH903 |
site_id | AG4 |
Number of Residues | 10 |
Details | binding site for residue GOL D 803 |
Chain | Residue |
D | ARG112 |
D | ASN150 |
D | GLU151 |
D | ASN247 |
D | ASP278 |
D | GLU311 |
D | TRP345 |
D | GLU355 |
D | HOH975 |
D | HOH1044 |
site_id | AG5 |
Number of Residues | 2 |
Details | binding site for residue GOL D 804 |
Chain | Residue |
D | GLY205 |
D | ARG212 |
site_id | AG6 |
Number of Residues | 7 |
Details | binding site for residue GOL D 805 |
Chain | Residue |
D | PHE441 |
D | GLU442 |
D | ASN444 |
D | ALA621 |
D | GLY622 |
D | VAL624 |
D | HOH1038 |
site_id | AG7 |
Number of Residues | 7 |
Details | binding site for residue GOL D 806 |
Chain | Residue |
D | ASP97 |
D | THR101 |
D | SER159 |
D | HIS160 |
D | HOH932 |
D | HOH1032 |
D | HOH1101 |
site_id | AG8 |
Number of Residues | 3 |
Details | binding site for residue GOL D 807 |
Chain | Residue |
D | ARG377 |
D | ARG380 |
D | HOH919 |
site_id | AG9 |
Number of Residues | 5 |
Details | binding site for residue GOL D 808 |
Chain | Residue |
D | ASP97 |
D | ASN119 |
D | HOH1218 |
E | ASN119 |
E | ALA121 |
site_id | AH1 |
Number of Residues | 2 |
Details | binding site for residue GOL D 809 |
Chain | Residue |
D | GLU173 |
D | ASN503 |
site_id | AH2 |
Number of Residues | 5 |
Details | binding site for residue SO4 E 801 |
Chain | Residue |
E | THR419 |
E | GLY424 |
E | GLY425 |
E | ARG528 |
E | HOH995 |
site_id | AH3 |
Number of Residues | 6 |
Details | binding site for residue SO4 E 802 |
Chain | Residue |
A | ARG171 |
A | TRP197 |
E | ARG171 |
E | ASN176 |
E | TRP197 |
E | HOH950 |
site_id | AH4 |
Number of Residues | 10 |
Details | binding site for residue GOL E 803 |
Chain | Residue |
E | ARG112 |
E | ASN150 |
E | GLU151 |
E | ASN247 |
E | ASP278 |
E | GLU311 |
E | TRP345 |
E | GLU355 |
E | HOH932 |
E | HOH933 |
site_id | AH5 |
Number of Residues | 11 |
Details | binding site for residue GOL E 804 |
Chain | Residue |
E | PHE441 |
E | GLU442 |
E | ASN444 |
E | LEU620 |
E | ALA621 |
E | GLY622 |
E | VAL624 |
E | CYS625 |
E | TYR643 |
E | HOH910 |
E | HOH1097 |
site_id | AH6 |
Number of Residues | 6 |
Details | binding site for residue GOL E 805 |
Chain | Residue |
E | THR102 |
E | GLY105 |
E | ASP202 |
E | THR204 |
E | HOH913 |
F | HIS108 |
site_id | AH7 |
Number of Residues | 7 |
Details | binding site for residue GOL E 806 |
Chain | Residue |
E | ASP97 |
E | THR101 |
E | SER159 |
E | HIS160 |
E | HOH913 |
E | HOH974 |
E | HOH1224 |
site_id | AH8 |
Number of Residues | 3 |
Details | binding site for residue GOL E 807 |
Chain | Residue |
E | ARG26 |
E | MET33 |
E | PHE366 |
site_id | AH9 |
Number of Residues | 1 |
Details | binding site for residue GOL E 808 |
Chain | Residue |
E | ARG380 |
site_id | AI1 |
Number of Residues | 6 |
Details | binding site for residue GOL E 809 |
Chain | Residue |
E | HIS562 |
E | ARG580 |
E | ALA582 |
E | ASP587 |
E | ASN610 |
E | HOH1148 |
site_id | AI2 |
Number of Residues | 3 |
Details | binding site for residue GOL E 810 |
Chain | Residue |
E | GLY205 |
E | SER206 |
E | ARG212 |
site_id | AI3 |
Number of Residues | 3 |
Details | binding site for residue SO4 E 811 |
Chain | Residue |
E | ASP598 |
E | ARG601 |
E | HOH1155 |
site_id | AI4 |
Number of Residues | 3 |
Details | binding site for residue SO4 F 801 |
Chain | Residue |
F | GLY424 |
F | GLY425 |
F | ARG528 |
site_id | AI5 |
Number of Residues | 4 |
Details | binding site for residue SO4 F 802 |
Chain | Residue |
F | ALA597 |
F | ASP598 |
F | ARG601 |
F | HOH1040 |
site_id | AI6 |
Number of Residues | 11 |
Details | binding site for residue GOL F 803 |
Chain | Residue |
F | TYR85 |
F | ARG112 |
F | ASN150 |
F | GLU151 |
F | ASN247 |
F | ASP278 |
F | GLU311 |
F | TRP345 |
F | GLU355 |
F | HOH977 |
F | HOH1073 |
site_id | AI7 |
Number of Residues | 8 |
Details | binding site for residue GOL F 804 |
Chain | Residue |
F | PHE441 |
F | GLU442 |
F | ASN444 |
F | ALA621 |
F | GLY622 |
F | VAL624 |
F | HOH1090 |
F | HOH1200 |
site_id | AI8 |
Number of Residues | 4 |
Details | binding site for residue GOL F 805 |
Chain | Residue |
F | ARG239 |
F | ASP240 |
F | ASP241 |
F | HOH901 |
site_id | AI9 |
Number of Residues | 3 |
Details | binding site for residue GOL F 806 |
Chain | Residue |
F | ARG377 |
F | ARG380 |
F | HOH1014 |
site_id | AJ1 |
Number of Residues | 1 |
Details | binding site for residue GOL F 807 |
Chain | Residue |
F | SER206 |
site_id | AJ2 |
Number of Residues | 4 |
Details | binding site for residue GOL F 808 |
Chain | Residue |
F | ARG123 |
F | GLN222 |
F | HOH967 |
F | HOH1081 |
site_id | AJ3 |
Number of Residues | 5 |
Details | binding site for residue GOL F 809 |
Chain | Residue |
F | LYS396 |
F | ARG397 |
F | SER628 |
F | HOH1006 |
F | HOH1196 |
site_id | AJ4 |
Number of Residues | 2 |
Details | binding site for residue GOL F 810 |
Chain | Residue |
F | HIS562 |
F | ARG580 |
site_id | AJ5 |
Number of Residues | 7 |
Details | binding site for residue GOL F 811 |
Chain | Residue |
F | ASP97 |
F | THR101 |
F | SER159 |
F | HIS160 |
F | HOH936 |
F | HOH1021 |
F | HOH1048 |
site_id | AJ6 |
Number of Residues | 7 |
Details | binding site for residue GOL F 812 |
Chain | Residue |
A | TYR95 |
A | ASN119 |
F | ASN119 |
F | ALA121 |
F | HOH1226 |
F | HOH1233 |
F | HOH1279 |
site_id | AJ7 |
Number of Residues | 1 |
Details | binding site for residue GOL F 813 |
Chain | Residue |
F | PHE243 |
site_id | AJ8 |
Number of Residues | 5 |
Details | binding site for residue SO4 F 814 |
Chain | Residue |
E | SER232 |
F | ARG696 |
F | GLN697 |
F | HOH906 |
F | HOH914 |