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5WYJ

Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1)

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
3B0000451biological_processrRNA 2'-O-methylation
3B0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3B0000494biological_processbox C/D sno(s)RNA 3'-end processing
3B0003723molecular_functionRNA binding
3B0005515molecular_functionprotein binding
3B0005634cellular_componentnucleus
3B0005654cellular_componentnucleoplasm
3B0005730cellular_componentnucleolus
3B0006338biological_processchromatin remodeling
3B0006356biological_processregulation of transcription by RNA polymerase I
3B0006364biological_processrRNA processing
3B0008168molecular_functionmethyltransferase activity
3B0008171molecular_functionO-methyltransferase activity
3B0008649molecular_functionrRNA methyltransferase activity
3B0015030cellular_componentCajal body
3B0016740molecular_functiontransferase activity
3B0030490biological_processmaturation of SSU-rRNA
3B0030686cellular_component90S preribosome
3B0031167biological_processrRNA methylation
3B0031428cellular_componentbox C/D methylation guide snoRNP complex
3B0032040cellular_componentsmall-subunit processome
3B0032259biological_processmethylation
3B0042254biological_processribosome biogenesis
3B1990259molecular_functionhistone H2AQ104 methyltransferase activity
3B1990904cellular_componentribonucleoprotein complex
3C0000451biological_processrRNA 2'-O-methylation
3C0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3C0000494biological_processbox C/D sno(s)RNA 3'-end processing
3C0003723molecular_functionRNA binding
3C0005515molecular_functionprotein binding
3C0005634cellular_componentnucleus
3C0005654cellular_componentnucleoplasm
3C0005730cellular_componentnucleolus
3C0006338biological_processchromatin remodeling
3C0006356biological_processregulation of transcription by RNA polymerase I
3C0006364biological_processrRNA processing
3C0008168molecular_functionmethyltransferase activity
3C0008171molecular_functionO-methyltransferase activity
3C0008649molecular_functionrRNA methyltransferase activity
3C0015030cellular_componentCajal body
3C0016740molecular_functiontransferase activity
3C0030490biological_processmaturation of SSU-rRNA
3C0030686cellular_component90S preribosome
3C0031167biological_processrRNA methylation
3C0031428cellular_componentbox C/D methylation guide snoRNP complex
3C0032040cellular_componentsmall-subunit processome
3C0032259biological_processmethylation
3C0042254biological_processribosome biogenesis
3C1990259molecular_functionhistone H2AQ104 methyltransferase activity
3C1990904cellular_componentribonucleoprotein complex
3D0000154biological_processrRNA modification
3D0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3D0000494biological_processbox C/D sno(s)RNA 3'-end processing
3D0003729molecular_functionmRNA binding
3D0005515molecular_functionprotein binding
3D0005634cellular_componentnucleus
3D0005654cellular_componentnucleoplasm
3D0005730cellular_componentnucleolus
3D0006364biological_processrRNA processing
3D0030490biological_processmaturation of SSU-rRNA
3D0030515molecular_functionsnoRNA binding
3D0030686cellular_component90S preribosome
3D0031428cellular_componentbox C/D methylation guide snoRNP complex
3D0032040cellular_componentsmall-subunit processome
3D0042254biological_processribosome biogenesis
3D1990904cellular_componentribonucleoprotein complex
3E0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3E0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3E0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3E0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3E0000494biological_processbox C/D sno(s)RNA 3'-end processing
3E0003729molecular_functionmRNA binding
3E0005515molecular_functionprotein binding
3E0005634cellular_componentnucleus
3E0005654cellular_componentnucleoplasm
3E0005730cellular_componentnucleolus
3E0006364biological_processrRNA processing
3E0017069molecular_functionsnRNA binding
3E0030490biological_processmaturation of SSU-rRNA
3E0030515molecular_functionsnoRNA binding
3E0030686cellular_component90S preribosome
3E0031428cellular_componentbox C/D methylation guide snoRNP complex
3E0032040cellular_componentsmall-subunit processome
3E0042254biological_processribosome biogenesis
3E1902570biological_processprotein localization to nucleolus
3E1990904cellular_componentribonucleoprotein complex
3F0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3F0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3F0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3F0005515molecular_functionprotein binding
3F0005634cellular_componentnucleus
3F0005654cellular_componentnucleoplasm
3F0005730cellular_componentnucleolus
3F0006364biological_processrRNA processing
3F0030490biological_processmaturation of SSU-rRNA
3F0030515molecular_functionsnoRNA binding
3F0030686cellular_component90S preribosome
3F0031428cellular_componentbox C/D methylation guide snoRNP complex
3F0032040cellular_componentsmall-subunit processome
3F0034511molecular_functionU3 snoRNA binding
3F0042254biological_processribosome biogenesis
3F1990904cellular_componentribonucleoprotein complex
3G0000245biological_processspliceosomal complex assembly
3G0000398biological_processmRNA splicing, via spliceosome
3G0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3G0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3G0000470biological_processmaturation of LSU-rRNA
3G0000494biological_processbox C/D sno(s)RNA 3'-end processing
3G0003723molecular_functionRNA binding
3G0005515molecular_functionprotein binding
3G0005634cellular_componentnucleus
3G0005654cellular_componentnucleoplasm
3G0005681cellular_componentspliceosomal complex
3G0005687cellular_componentU4 snRNP
3G0005730cellular_componentnucleolus
3G0006364biological_processrRNA processing
3G0006397biological_processmRNA processing
3G0008380biological_processRNA splicing
3G0022625cellular_componentcytosolic large ribosomal subunit
3G0030490biological_processmaturation of SSU-rRNA
3G0030621molecular_functionU4 snRNA binding
3G0031428cellular_componentbox C/D methylation guide snoRNP complex
3G0032040cellular_componentsmall-subunit processome
3G0034511molecular_functionU3 snoRNA binding
3G0042254biological_processribosome biogenesis
3G0043232cellular_componentintracellular non-membrane-bounded organelle
3G0046540cellular_componentU4/U6 x U5 tri-snRNP complex
3G0071001cellular_componentU4/U6 snRNP
3G0071011cellular_componentprecatalytic spliceosome
3G1905216biological_processpositive regulation of RNA binding
3G1990904cellular_componentribonucleoprotein complex
3H0000245biological_processspliceosomal complex assembly
3H0000398biological_processmRNA splicing, via spliceosome
3H0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3H0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3H0000470biological_processmaturation of LSU-rRNA
3H0000494biological_processbox C/D sno(s)RNA 3'-end processing
3H0003723molecular_functionRNA binding
3H0005515molecular_functionprotein binding
3H0005634cellular_componentnucleus
3H0005654cellular_componentnucleoplasm
3H0005681cellular_componentspliceosomal complex
3H0005687cellular_componentU4 snRNP
3H0005730cellular_componentnucleolus
3H0006364biological_processrRNA processing
3H0006397biological_processmRNA processing
3H0008380biological_processRNA splicing
3H0022625cellular_componentcytosolic large ribosomal subunit
3H0030490biological_processmaturation of SSU-rRNA
3H0030621molecular_functionU4 snRNA binding
3H0031428cellular_componentbox C/D methylation guide snoRNP complex
3H0032040cellular_componentsmall-subunit processome
3H0034511molecular_functionU3 snoRNA binding
3H0042254biological_processribosome biogenesis
3H0043232cellular_componentintracellular non-membrane-bounded organelle
3H0046540cellular_componentU4/U6 x U5 tri-snRNP complex
3H0071001cellular_componentU4/U6 snRNP
3H0071011cellular_componentprecatalytic spliceosome
3H1905216biological_processpositive regulation of RNA binding
3H1990904cellular_componentribonucleoprotein complex
B10000166molecular_functionnucleotide binding
B10000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B10000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B10000479biological_processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B10000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B10003729molecular_functionmRNA binding
B10003924molecular_functionGTPase activity
B10005515molecular_functionprotein binding
B10005524molecular_functionATP binding
B10005525molecular_functionGTP binding
B10005634cellular_componentnucleus
B10005654cellular_componentnucleoplasm
B10005730cellular_componentnucleolus
B10005737cellular_componentcytoplasm
B10005739cellular_componentmitochondrion
B10016887molecular_functionATP hydrolysis activity
B10030490biological_processmaturation of SSU-rRNA
B10030686cellular_component90S preribosome
B10032040cellular_componentsmall-subunit processome
B10034511molecular_functionU3 snoRNA binding
B10042254biological_processribosome biogenesis
B10042274biological_processribosomal small subunit biogenesis
B12000232biological_processregulation of rRNA processing
BA0000028biological_processribosomal small subunit assembly
BA0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BA0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BA0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BA0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BA0000920biological_processseptum digestion after cytokinesis
BA0003729molecular_functionmRNA binding
BA0005515molecular_functionprotein binding
BA0005634cellular_componentnucleus
BA0005654cellular_componentnucleoplasm
BA0005730cellular_componentnucleolus
BA0005737cellular_componentcytoplasm
BA0006364biological_processrRNA processing
BA0030010biological_processestablishment of cell polarity
BA0030490biological_processmaturation of SSU-rRNA
BA0030686cellular_component90S preribosome
BA0032040cellular_componentsmall-subunit processome
BA0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
BA0042254biological_processribosome biogenesis
BA1990904cellular_componentribonucleoprotein complex
BB0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BB0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BB0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BB0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BB0005515molecular_functionprotein binding
BB0005634cellular_componentnucleus
BB0005654cellular_componentnucleoplasm
BB0005730cellular_componentnucleolus
BB0006364biological_processrRNA processing
BB0030490biological_processmaturation of SSU-rRNA
BB0030515molecular_functionsnoRNA binding
BB0030686cellular_component90S preribosome
BB0032040cellular_componentsmall-subunit processome
BB0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
BB0034511molecular_functionU3 snoRNA binding
BB0042254biological_processribosome biogenesis
BB1990904cellular_componentribonucleoprotein complex
BC0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BC0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BC0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BC0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BC0005515molecular_functionprotein binding
BC0005634cellular_componentnucleus
BC0005654cellular_componentnucleoplasm
BC0005730cellular_componentnucleolus
BC0006364biological_processrRNA processing
BC0030490biological_processmaturation of SSU-rRNA
BC0030686cellular_component90S preribosome
BC0032040cellular_componentsmall-subunit processome
BC0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
BC0034511molecular_functionU3 snoRNA binding
BC0042254biological_processribosome biogenesis
BC1990904cellular_componentribonucleoprotein complex
BD0000292biological_processRNA fragment catabolic process
BD0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BD0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BD0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BD0003674molecular_functionmolecular_function
BD0005515molecular_functionprotein binding
BD0005634cellular_componentnucleus
BD0005654cellular_componentnucleoplasm
BD0005730cellular_componentnucleolus
BD0006364biological_processrRNA processing
BD0030490biological_processmaturation of SSU-rRNA
BD0030686cellular_component90S preribosome
BD0032040cellular_componentsmall-subunit processome
BD0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
BD0042254biological_processribosome biogenesis
BD1990904cellular_componentribonucleoprotein complex
BE0003674molecular_functionmolecular_function
BE0005515molecular_functionprotein binding
BE0005634cellular_componentnucleus
BE0005654cellular_componentnucleoplasm
BE0005730cellular_componentnucleolus
BE0006364biological_processrRNA processing
BE0030490biological_processmaturation of SSU-rRNA
BE0030686cellular_component90S preribosome
BE0032040cellular_componentsmall-subunit processome
BE0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
BE0042254biological_processribosome biogenesis
BE1990904cellular_componentribonucleoprotein complex
CA0000028biological_processribosomal small subunit assembly
CA0005515molecular_functionprotein binding
CA0005634cellular_componentnucleus
CA0005654cellular_componentnucleoplasm
CA0005730cellular_componentnucleolus
CA0006364biological_processrRNA processing
CA0019843molecular_functionrRNA binding
CA0030490biological_processmaturation of SSU-rRNA
CA0032040cellular_componentsmall-subunit processome
CA0032545cellular_componentCURI complex
CA0034456cellular_componentUTP-C complex
CA0042254biological_processribosome biogenesis
CA0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
CA0060962biological_processregulation of ribosomal protein gene transcription by RNA polymerase II
CB0000028biological_processribosomal small subunit assembly
CB0003674molecular_functionmolecular_function
CB0003723molecular_functionRNA binding
CB0005515molecular_functionprotein binding
CB0005634cellular_componentnucleus
CB0005654cellular_componentnucleoplasm
CB0005730cellular_componentnucleolus
CB0006364biological_processrRNA processing
CB0006409biological_processtRNA export from nucleus
CB0030490biological_processmaturation of SSU-rRNA
CB0030686cellular_component90S preribosome
CB0032040cellular_componentsmall-subunit processome
CB0032545cellular_componentCURI complex
CB0034456cellular_componentUTP-C complex
CB0042254biological_processribosome biogenesis
CB0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
CB0060962biological_processregulation of ribosomal protein gene transcription by RNA polymerase II
CB1990904cellular_componentribonucleoprotein complex
E10000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
E10000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
E10000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
E10003723molecular_functionRNA binding
E10005515molecular_functionprotein binding
E10005634cellular_componentnucleus
E10005654cellular_componentnucleoplasm
E10005730cellular_componentnucleolus
E10005737cellular_componentcytoplasm
E10005880cellular_componentnuclear microtubule
E10006364biological_processrRNA processing
E10008168molecular_functionmethyltransferase activity
E10016740molecular_functiontransferase activity
E10019843molecular_functionrRNA binding
E10030490biological_processmaturation of SSU-rRNA
E10030686cellular_component90S preribosome
E10031167biological_processrRNA methylation
E10032040cellular_componentsmall-subunit processome
E10032259biological_processmethylation
E10034399cellular_componentnuclear periphery
E10042254biological_processribosome biogenesis
E10042274biological_processribosomal small subunit biogenesis
E10042802molecular_functionidentical protein binding
E10070037molecular_functionrRNA (pseudouridine) methyltransferase activity
E10070475biological_processrRNA base methylation
E11990904cellular_componentribonucleoprotein complex
E20000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
E20000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
E20000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
E20003723molecular_functionRNA binding
E20005515molecular_functionprotein binding
E20005634cellular_componentnucleus
E20005654cellular_componentnucleoplasm
E20005730cellular_componentnucleolus
E20005737cellular_componentcytoplasm
E20005880cellular_componentnuclear microtubule
E20006364biological_processrRNA processing
E20008168molecular_functionmethyltransferase activity
E20016740molecular_functiontransferase activity
E20019843molecular_functionrRNA binding
E20030490biological_processmaturation of SSU-rRNA
E20030686cellular_component90S preribosome
E20031167biological_processrRNA methylation
E20032040cellular_componentsmall-subunit processome
E20032259biological_processmethylation
E20034399cellular_componentnuclear periphery
E20042254biological_processribosome biogenesis
E20042274biological_processribosomal small subunit biogenesis
E20042802molecular_functionidentical protein binding
E20070037molecular_functionrRNA (pseudouridine) methyltransferase activity
E20070475biological_processrRNA base methylation
E21990904cellular_componentribonucleoprotein complex
E30000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
E30005515molecular_functionprotein binding
E30005634cellular_componentnucleus
E30005730cellular_componentnucleolus
E30005737cellular_componentcytoplasm
E30006364biological_processrRNA processing
E30016973biological_processpoly(A)+ mRNA export from nucleus
E30030490biological_processmaturation of SSU-rRNA
E30030515molecular_functionsnoRNA binding
E30030686cellular_component90S preribosome
E30030688cellular_componentpreribosome, small subunit precursor
E30032040cellular_componentsmall-subunit processome
E30042254biological_processribosome biogenesis
E30043229cellular_componentintracellular organelle
K10000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
K10003674molecular_functionmolecular_function
K10003676molecular_functionnucleic acid binding
K10003723molecular_functionRNA binding
K10005515molecular_functionprotein binding
K10005634cellular_componentnucleus
K10005654cellular_componentnucleoplasm
K10005730cellular_componentnucleolus
K10006364biological_processrRNA processing
K10030490biological_processmaturation of SSU-rRNA
K10030686cellular_component90S preribosome
K10030688cellular_componentpreribosome, small subunit precursor
K10032040cellular_componentsmall-subunit processome
K10042254biological_processribosome biogenesis
K10042274biological_processribosomal small subunit biogenesis
K11990904cellular_componentribonucleoprotein complex
MA0003723molecular_functionRNA binding
MA0003735molecular_functionstructural constituent of ribosome
MA0005515molecular_functionprotein binding
MA0005634cellular_componentnucleus
MA0005654cellular_componentnucleoplasm
MA0005730cellular_componentnucleolus
MA0006364biological_processrRNA processing
MA0015935cellular_componentsmall ribosomal subunit
MA0019843molecular_functionrRNA binding
MA0030490biological_processmaturation of SSU-rRNA
MA0030515molecular_functionsnoRNA binding
MA0030686cellular_component90S preribosome
MA0032040cellular_componentsmall-subunit processome
MA0034457cellular_componentMpp10 complex
MA0042254biological_processribosome biogenesis
MA0042274biological_processribosomal small subunit biogenesis
MA1990904cellular_componentribonucleoprotein complex
MB0005515molecular_functionprotein binding
MB0005634cellular_componentnucleus
MB0005654cellular_componentnucleoplasm
MB0005730cellular_componentnucleolus
MB0006364biological_processrRNA processing
MB0019843molecular_functionrRNA binding
MB0030490biological_processmaturation of SSU-rRNA
MB0030515molecular_functionsnoRNA binding
MB0030686cellular_component90S preribosome
MB0032040cellular_componentsmall-subunit processome
MB0034457cellular_componentMpp10 complex
MB0042134molecular_functionrRNA primary transcript binding
MB0042254biological_processribosome biogenesis
MB0042274biological_processribosomal small subunit biogenesis
MB0043047molecular_functionsingle-stranded telomeric DNA binding
MB1990904cellular_componentribonucleoprotein complex
MC0005634cellular_componentnucleus
MC0005732cellular_componentsno(s)RNA-containing ribonucleoprotein complex
MC0006364biological_processrRNA processing
MC0034457cellular_componentMpp10 complex
P10000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
P10000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
P10003723molecular_functionRNA binding
P10005634cellular_componentnucleus
P10005730cellular_componentnucleolus
P10005737cellular_componentcytoplasm
P10030686cellular_component90S preribosome
P10042254biological_processribosome biogenesis
P10043248biological_processproteasome assembly
P10051082molecular_functionunfolded protein binding
R10000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
R10000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
R10000479biological_processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
R10000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
R10003824molecular_functioncatalytic activity
R10003963molecular_functionRNA-3'-phosphate cyclase activity
R10004521molecular_functionRNA endonuclease activity
R10005515molecular_functionprotein binding
R10005634cellular_componentnucleus
R10005654cellular_componentnucleoplasm
R10005730cellular_componentnucleolus
R10006364biological_processrRNA processing
R10006396biological_processRNA processing
R10008047molecular_functionenzyme activator activity
R10030490biological_processmaturation of SSU-rRNA
R10030686cellular_component90S preribosome
R10032040cellular_componentsmall-subunit processome
R10042254biological_processribosome biogenesis
R10042274biological_processribosomal small subunit biogenesis
R12000232biological_processregulation of rRNA processing
R20000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
R20000464biological_processendonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
R20000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
R20000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
R20003676molecular_functionnucleic acid binding
R20003723molecular_functionRNA binding
R20003729molecular_functionmRNA binding
R20005515molecular_functionprotein binding
R20005634cellular_componentnucleus
R20005654cellular_componentnucleoplasm
R20005730cellular_componentnucleolus
R20006364biological_processrRNA processing
R20006396biological_processRNA processing
R20008266molecular_functionpoly(U) RNA binding
R20030490biological_processmaturation of SSU-rRNA
R20030515molecular_functionsnoRNA binding
R20030686cellular_component90S preribosome
R20032040cellular_componentsmall-subunit processome
R20034463biological_process90S preribosome assembly
R20034511molecular_functionU3 snoRNA binding
R20034512molecular_functionbox C/D sno(s)RNA binding
R20034513molecular_functionbox H/ACA snoRNA binding
R20042134molecular_functionrRNA primary transcript binding
R20042254biological_processribosome biogenesis
R21990904cellular_componentribonucleoprotein complex
SC0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SC0002181biological_processcytoplasmic translation
SC0003735molecular_functionstructural constituent of ribosome
SC0005737cellular_componentcytoplasm
SC0005829cellular_componentcytosol
SC0005840cellular_componentribosome
SC0006412biological_processtranslation
SC0022627cellular_componentcytosolic small ribosomal subunit
SC0030686cellular_component90S preribosome
SC1990904cellular_componentribonucleoprotein complex
SF0002181biological_processcytoplasmic translation
SF0003723molecular_functionRNA binding
SF0003735molecular_functionstructural constituent of ribosome
SF0005737cellular_componentcytoplasm
SF0005829cellular_componentcytosol
SF0005840cellular_componentribosome
SF0006412biological_processtranslation
SF0019843molecular_functionrRNA binding
SF0022627cellular_componentcytosolic small ribosomal subunit
SF0030686cellular_component90S preribosome
SF0032991cellular_componentprotein-containing complex
SF0043229cellular_componentintracellular organelle
SF1990904cellular_componentribonucleoprotein complex
SG0000028biological_processribosomal small subunit assembly
SG0000054biological_processribosomal subunit export from nucleus
SG0002181biological_processcytoplasmic translation
SG0003723molecular_functionRNA binding
SG0003729molecular_functionmRNA binding
SG0003735molecular_functionstructural constituent of ribosome
SG0005515molecular_functionprotein binding
SG0005737cellular_componentcytoplasm
SG0005829cellular_componentcytosol
SG0005840cellular_componentribosome
SG0006412biological_processtranslation
SG0006450biological_processregulation of translational fidelity
SG0015935cellular_componentsmall ribosomal subunit
SG0019843molecular_functionrRNA binding
SG0022627cellular_componentcytosolic small ribosomal subunit
SG0030686cellular_component90S preribosome
SG1990904cellular_componentribonucleoprotein complex
SH0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH0003735molecular_functionstructural constituent of ribosome
SH0005634cellular_componentnucleus
SH0005654cellular_componentnucleoplasm
SH0005730cellular_componentnucleolus
SH0005737cellular_componentcytoplasm
SH0005829cellular_componentcytosol
SH0005840cellular_componentribosome
SH0006364biological_processrRNA processing
SH0006412biological_processtranslation
SH0022627cellular_componentcytosolic small ribosomal subunit
SH0030686cellular_component90S preribosome
SH0032040cellular_componentsmall-subunit processome
SH0042254biological_processribosome biogenesis
SH1990904cellular_componentribonucleoprotein complex
SI0002181biological_processcytoplasmic translation
SI0003735molecular_functionstructural constituent of ribosome
SI0005634cellular_componentnucleus
SI0005654cellular_componentnucleoplasm
SI0005730cellular_componentnucleolus
SI0005737cellular_componentcytoplasm
SI0005829cellular_componentcytosol
SI0005840cellular_componentribosome
SI0006364biological_processrRNA processing
SI0006412biological_processtranslation
SI0022627cellular_componentcytosolic small ribosomal subunit
SI0030686cellular_component90S preribosome
SI0032040cellular_componentsmall-subunit processome
SI0042254biological_processribosome biogenesis
SI0042274biological_processribosomal small subunit biogenesis
SI1990904cellular_componentribonucleoprotein complex
SJ0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SJ0003735molecular_functionstructural constituent of ribosome
SJ0005737cellular_componentcytoplasm
SJ0005829cellular_componentcytosol
SJ0005840cellular_componentribosome
SJ0006412biological_processtranslation
SJ0022627cellular_componentcytosolic small ribosomal subunit
SJ0030686cellular_component90S preribosome
SJ1990904cellular_componentribonucleoprotein complex
SK0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SK0003723molecular_functionRNA binding
SK0003735molecular_functionstructural constituent of ribosome
SK0005634cellular_componentnucleus
SK0005654cellular_componentnucleoplasm
SK0005730cellular_componentnucleolus
SK0005737cellular_componentcytoplasm
SK0005829cellular_componentcytosol
SK0005840cellular_componentribosome
SK0006364biological_processrRNA processing
SK0006412biological_processtranslation
SK0015935cellular_componentsmall ribosomal subunit
SK0019843molecular_functionrRNA binding
SK0022627cellular_componentcytosolic small ribosomal subunit
SK0030686cellular_component90S preribosome
SK0032040cellular_componentsmall-subunit processome
SK0042254biological_processribosome biogenesis
SK0042274biological_processribosomal small subunit biogenesis
SK0043226cellular_componentorganelle
SK1990904cellular_componentribonucleoprotein complex
SM0000028biological_processribosomal small subunit assembly
SM0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SM0003723molecular_functionRNA binding
SM0003735molecular_functionstructural constituent of ribosome
SM0005737cellular_componentcytoplasm
SM0005829cellular_componentcytosol
SM0005840cellular_componentribosome
SM0006412biological_processtranslation
SM0019843molecular_functionrRNA binding
SM0022627cellular_componentcytosolic small ribosomal subunit
SM0030686cellular_component90S preribosome
SM1990904cellular_componentribonucleoprotein complex
SN0002181biological_processcytoplasmic translation
SN0003735molecular_functionstructural constituent of ribosome
SN0005737cellular_componentcytoplasm
SN0005829cellular_componentcytosol
SN0005840cellular_componentribosome
SN0006412biological_processtranslation
SN0022627cellular_componentcytosolic small ribosomal subunit
SN0042274biological_processribosomal small subunit biogenesis
SN1990145biological_processmaintenance of translational fidelity
SN1990904cellular_componentribonucleoprotein complex
SO0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SO0002181biological_processcytoplasmic translation
SO0003735molecular_functionstructural constituent of ribosome
SO0005730cellular_componentnucleolus
SO0005737cellular_componentcytoplasm
SO0005829cellular_componentcytosol
SO0005840cellular_componentribosome
SO0006412biological_processtranslation
SO0022627cellular_componentcytosolic small ribosomal subunit
SO0030686cellular_component90S preribosome
SO0070181molecular_functionsmall ribosomal subunit rRNA binding
SO1990904cellular_componentribonucleoprotein complex
SP0000028biological_processribosomal small subunit assembly
SP0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SP0002181biological_processcytoplasmic translation
SP0003729molecular_functionmRNA binding
SP0003735molecular_functionstructural constituent of ribosome
SP0005634cellular_componentnucleus
SP0005654cellular_componentnucleoplasm
SP0005730cellular_componentnucleolus
SP0005737cellular_componentcytoplasm
SP0005829cellular_componentcytosol
SP0005840cellular_componentribosome
SP0006364biological_processrRNA processing
SP0006412biological_processtranslation
SP0022627cellular_componentcytosolic small ribosomal subunit
SP0030686cellular_component90S preribosome
SP0032040cellular_componentsmall-subunit processome
SP0042254biological_processribosome biogenesis
SP1990904cellular_componentribonucleoprotein complex
SR0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SR0003723molecular_functionRNA binding
SR0003735molecular_functionstructural constituent of ribosome
SR0005737cellular_componentcytoplasm
SR0005829cellular_componentcytosol
SR0005840cellular_componentribosome
SR0006412biological_processtranslation
SR0022627cellular_componentcytosolic small ribosomal subunit
SR0030686cellular_component90S preribosome
SR1990904cellular_componentribonucleoprotein complex
SX0002181biological_processcytoplasmic translation
SX0003735molecular_functionstructural constituent of ribosome
SX0005737cellular_componentcytoplasm
SX0005829cellular_componentcytosol
SX0005840cellular_componentribosome
SX0006412biological_processtranslation
SX0022627cellular_componentcytosolic small ribosomal subunit
SX1990904cellular_componentribonucleoprotein complex
SY0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SY0003735molecular_functionstructural constituent of ribosome
SY0005737cellular_componentcytoplasm
SY0005829cellular_componentcytosol
SY0005840cellular_componentribosome
SY0006412biological_processtranslation
SY0006450biological_processregulation of translational fidelity
SY0015935cellular_componentsmall ribosomal subunit
SY0022627cellular_componentcytosolic small ribosomal subunit
SY1990145biological_processmaintenance of translational fidelity
SY1990904cellular_componentribonucleoprotein complex
SZ0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SZ0002181biological_processcytoplasmic translation
SZ0003735molecular_functionstructural constituent of ribosome
SZ0005737cellular_componentcytoplasm
SZ0005739cellular_componentmitochondrion
SZ0005829cellular_componentcytosol
SZ0005840cellular_componentribosome
SZ0006412biological_processtranslation
SZ0022627cellular_componentcytosolic small ribosomal subunit
SZ1990904cellular_componentribonucleoprotein complex
Sc0000028biological_processribosomal small subunit assembly
Sc0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Sc0003723molecular_functionRNA binding
Sc0003735molecular_functionstructural constituent of ribosome
Sc0005737cellular_componentcytoplasm
Sc0005829cellular_componentcytosol
Sc0005840cellular_componentribosome
Sc0006412biological_processtranslation
Sc0008270molecular_functionzinc ion binding
Sc0022627cellular_componentcytosolic small ribosomal subunit
Sc0044391cellular_componentribosomal subunit
Sc0046872molecular_functionmetal ion binding
Sc1990904cellular_componentribonucleoprotein complex
Sd0000028biological_processribosomal small subunit assembly
Sd0000054biological_processribosomal subunit export from nucleus
Sd0003735molecular_functionstructural constituent of ribosome
Sd0005737cellular_componentcytoplasm
Sd0005829cellular_componentcytosol
Sd0005840cellular_componentribosome
Sd0006412biological_processtranslation
Sd0022627cellular_componentcytosolic small ribosomal subunit
Sd0030490biological_processmaturation of SSU-rRNA
Sd1900153biological_processpositive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
Sd1990904cellular_componentribonucleoprotein complex
Sf0002181biological_processcytoplasmic translation
Sf0003735molecular_functionstructural constituent of ribosome
Sf0005737cellular_componentcytoplasm
Sf0005829cellular_componentcytosol
Sf0005840cellular_componentribosome
Sf0006412biological_processtranslation
Sf0010494cellular_componentcytoplasmic stress granule
Sf0022627cellular_componentcytosolic small ribosomal subunit
Sf1990904cellular_componentribonucleoprotein complex
Sg0000028biological_processribosomal small subunit assembly
Sg0002109biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)
Sg0002181biological_processcytoplasmic translation
Sg0003735molecular_functionstructural constituent of ribosome
Sg0005634cellular_componentnucleus
Sg0005737cellular_componentcytoplasm
Sg0005829cellular_componentcytosol
Sg0005840cellular_componentribosome
Sg0006412biological_processtranslation
Sg0008270molecular_functionzinc ion binding
Sg0016567biological_processprotein ubiquitination
Sg0019941biological_processmodification-dependent protein catabolic process
Sg0022627cellular_componentcytosolic small ribosomal subunit
Sg0031386molecular_functionprotein tag activity
Sg0031625molecular_functionubiquitin protein ligase binding
Sg0042254biological_processribosome biogenesis
Sg0044391cellular_componentribosomal subunit
Sg0046872molecular_functionmetal ion binding
Sg1990904cellular_componentribonucleoprotein complex
U40000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
U40000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
U40000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
U40004521molecular_functionRNA endonuclease activity
U40004540molecular_functionRNA nuclease activity
U40005634cellular_componentnucleus
U40005654cellular_componentnucleoplasm
U40005730cellular_componentnucleolus
U40006364biological_processrRNA processing
U40008270molecular_functionzinc ion binding
U40030490biological_processmaturation of SSU-rRNA
U40032040cellular_componentsmall-subunit processome
U40042254biological_processribosome biogenesis
U50000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
U50000470biological_processmaturation of LSU-rRNA
U50003674molecular_functionmolecular_function
U50003723molecular_functionRNA binding
U50005634cellular_componentnucleus
U50005730cellular_componentnucleolus
U50006364biological_processrRNA processing
U50022625cellular_componentcytosolic large ribosomal subunit
U50030490biological_processmaturation of SSU-rRNA
U50030686cellular_component90S preribosome
U50032040cellular_componentsmall-subunit processome
U50042254biological_processribosome biogenesis
U50042274biological_processribosomal small subunit biogenesis
U51990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CedknVPYvfVpSRvaLG
ChainResidueDetails
3GCYS71-GLY88

site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
SgLYS27-ASP52

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPIS
ChainResidueDetails
SMGLY120-SER132

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAR
ChainResidueDetails
SXGLY100-ARG117

site_idPS01189
Number of Residues19
DetailsRIBOSOMAL_S12E Ribosomal protein S12e signature. ALKvvLrtAlvhDGLarGL
ChainResidueDetails
SNALA27-LEU45

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GLrIgrieDvTPvPSD
ChainResidueDetails
SPLEU102-ASP124

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY
ChainResidueDetails
SOVAL98-TYR128

site_idPS01287
Number of Residues11
DetailsRTC RNA 3'-terminal phosphate cyclase signature. RGspPlGGGeV
ChainResidueDetails
R1ARG156-VAL166

site_idPS00961
Number of Residues9
DetailsRIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL
ChainResidueDetails
SdGLU58-LEU66

site_idPS00529
Number of Residues23
DetailsRIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKSvGFGlVYNSvaeakkfE
ChainResidueDetails
SZPHE64-GLU86

site_idPS01168
Number of Residues33
DetailsRIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgClnittvFShAqtavtCesCStiLctPtG
ChainResidueDetails
ScLYS36-GLY68

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvSQvyAirqAiAKGL
ChainResidueDetails
SRGLY71-LEU89

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR
ChainResidueDetails
SYLYS62-ARG69

site_idPS00578
Number of Residues12
DetailsRIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM
ChainResidueDetails
SHILE52-MET63

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVYKlglAkSvhhARvLI
ChainResidueDetails
SKLEU105-ILE129

site_idPS00528
Number of Residues15
DetailsRIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPhhWlLdK
ChainResidueDetails
SFHIS8-LYS22

site_idPS01193
Number of Residues20
DetailsRIBOSOMAL_S8E Ribosomal protein S8e signature. RsaTGAkraqf.RkKrKfELG
ChainResidueDetails
SJARG11-GLY30

site_idPS00948
Number of Residues14
DetailsRIBOSOMAL_S7E Ribosomal protein S7e signature. KLtRELEKKFQdRH
ChainResidueDetails
SILYS76-HIS89

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmngrnnGKKlkavrIIkhT
ChainResidueDetails
SGGLU91-THR117

site_idPS01191
Number of Residues13
DetailsRIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVvEvCLaDL
ChainResidueDetails
SCLEU61-LEU73

site_idPS00566
Number of Residues15
DetailsFIBRILLARIN Fibrillarin signature. GVVYAVEFShRpgRE
ChainResidueDetails
3BGLY192-GLU206

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LASGdtNgMVKVWDL
ChainResidueDetails
BCLEU163-LEU177
BAMET402-LEU416
BEILE600-LEU614
BCLEU211-PHE225
BCLEU590-CYS604
BBLEU136-LEU150
BBLEU177-LEU191
BBLEU405-ILE419
BBLEU488-PHE502
BAILE206-PHE220
BAVAL360-ILE374

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues23
DetailsZN_FING: C4-type
ChainResidueDetails
SgCYS121-CYS144
E1GLY207
SNLYS95
SNLYS114
E2LEU180
E2GLY207
E2GLY212
E2LEU227

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17287358, ECO:0007744|PubMed:19779198
ChainResidueDetails
SgSER122
SMLYS141
SMLYS148
SILYS84
SOLYS43
SMLYS56
SMLYS57
SMLYS79
SMLYS96
SMLYS105
SMLYS133

site_idSWS_FT_FI3
Number of Residues10
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
ChainResidueDetails
SgLYS6
SgLYS113
SRSER76
SgLYS11
SgLYS27
SgLYS29
SgLYS33
SgLYS48
SgLYS63
SgLYS107

site_idSWS_FT_FI4
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214
ChainResidueDetails
SgGLY76
SJSER154
SJSER155
SJSER161
SFLYS168
SFLYS174
SFLYS179
SFLYS211
SFLYS233

site_idSWS_FT_FI5
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
ChainResidueDetails
SRLYS30
3CARG40
SRLYS47
SRLYS59

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18407956
ChainResidueDetails
SJSER158
3CARG48

site_idSWS_FT_FI7
Number of Residues2
DetailsMOD_RES: Omega-N-methylarginine; by HMT1; alternate => ECO:0000269|PubMed:23865587, ECO:0000269|PubMed:26081071, ECO:0000305|PubMed:12756332
ChainResidueDetails
3BARG58
3CARG58

site_idSWS_FT_FI8
Number of Residues2
DetailsMOD_RES: Omega-N-methylarginine; by HMT1; alternate => ECO:0000269|PubMed:23865587, ECO:0000269|PubMed:26046779, ECO:0000269|PubMed:33856219, ECO:0000305|PubMed:12756332
ChainResidueDetails
3BARG70
3CARG70

site_idSWS_FT_FI9
Number of Residues4
DetailsMOD_RES: Omega-N-methylarginine; by HMT1; alternate => ECO:0000269|PubMed:23865587, ECO:0000269|PubMed:26046779, ECO:0000269|PubMed:26081071, ECO:0000269|PubMed:33856219, ECO:0000305|PubMed:12756332
ChainResidueDetails
3BARG73
3BARG81
3CARG73
3CARG81

site_idSWS_FT_FI10
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
ChainResidueDetails
3BLYS150
3CLYS150

218853

PDB entries from 2024-04-24

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