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5UB8

Crystal structure of YPT31, a Rab family GTPase from Candida albicans, in complex with GDP and Zn(II)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0005794cellular_componentGolgi apparatus
A0006887biological_processexocytosis
A0031521cellular_componentspitzenkorper
A0042273biological_processribosomal large subunit biogenesis
A0046872molecular_functionmetal ion binding
A0055037cellular_componentrecycling endosome
A1903561cellular_componentextracellular vesicle
Functional Information from PDB Data
site_idAC1
Number of Residues22
Detailsbinding site for residue GDP A 301
ChainResidue
AGLY25
AGLU43
AASN128
ALYS129
AASP131
ALEU132
ASER158
AALA159
ALEU160
AZN302
AHOH407
AVAL26
AHOH412
AHOH417
AHOH440
AGLY27
ALYS28
ASER29
AASN30
APHE40
AASN41
ALEU42

site_idAC2
Number of Residues6
Detailsbinding site for residue ZN A 302
ChainResidue
ASER29
AGDP301
AHOH407
AHOH411
AHOH412
AHOH417

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 303
ChainResidue
AGLU112
AHIS116
AGLU149
AHOH502

Functional Information from PROSITE/UniProt
site_idPS00675
Number of Residues14
DetailsSIGMA54_INTERACT_1 Sigma-54 interaction domain ATP-binding region A signature. IVLiGDSGVGKsnL
ChainResidueDetails
AILE18-LEU31

220472

PDB entries from 2024-05-29

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