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5SAA

PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 NendoU in complex with Z319891284

Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue CIT A 401
ChainResidue
AHIS234
AHOH619
AGLN244
ALEU245
AGLY246
AGLY247
AHIS249
ALYS289
ATHR340
AHOH574

site_idAC2
Number of Residues6
Detailsbinding site for residue ZQD A 402
ChainResidue
AGLY169
AGLU170
AVAL172
ALYS173
ATHR174
AGLN175

site_idAC3
Number of Residues12
Detailsbinding site for residue CIT B 401
ChainResidue
BHIS234
BGLN244
BLEU245
BGLY246
BGLY247
BHIS249
BLYS289
BTHR340
BTYR342
BHOH534
BHOH611
BHOH699

site_idAC4
Number of Residues6
Detailsbinding site for residue ZQD B 402
ChainResidue
BGLY169
BGLU170
BVAL172
BLYS173
BTHR174
BGLN175

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor; for uridylate-specific endoribonuclease nsp15 activity => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093
ChainResidueDetails
BHIS234
AHIS234

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton acceptor; for uridylate-specific endoribonuclease nsp15 activity => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093
ChainResidueDetails
BHIS249
AHIS249

site_idSWS_FT_FI3
Number of Residues2
DetailsACT_SITE: For uridylate-specific endoribonuclease nsp15 activity => ECO:0000269|PubMed:33504779
ChainResidueDetails
BLYS289
ALYS289

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093
ChainResidueDetails
BLYS289
ALYS289

site_idSWS_FT_FI5
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:33564093
ChainResidueDetails
BTHR340
ATHR340

site_idSWS_FT_FI6
Number of Residues2
DetailsSITE: Transition state stabilizer => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093
ChainResidueDetails
BLYS289
ALYS289

site_idSWS_FT_FI7
Number of Residues2
DetailsSITE: Uracil recognition site => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093
ChainResidueDetails
ASER293
BSER293

site_idSWS_FT_FI8
Number of Residues2
DetailsSITE: Cleavage; by 3CL-PRO => ECO:0000250|UniProtKB:P0C6V3
ChainResidueDetails
AGLN346
BGLN346

221051

PDB entries from 2024-06-12

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