5LVK
Human Lysozyme co-crystallized with [H2Ind][trans-RuCl4(DMSO)(HInd)]
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003796 | molecular_function | lysozyme activity |
A | 0005576 | cellular_component | extracellular region |
A | 0005615 | cellular_component | extracellular space |
A | 0006954 | biological_process | inflammatory response |
A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
A | 0019730 | biological_process | antimicrobial humoral response |
A | 0031640 | biological_process | killing of cells of another organism |
A | 0035578 | cellular_component | azurophil granule lumen |
A | 0035580 | cellular_component | specific granule lumen |
A | 0042742 | biological_process | defense response to bacterium |
A | 0042802 | molecular_function | identical protein binding |
A | 0050829 | biological_process | defense response to Gram-negative bacterium |
A | 0050830 | biological_process | defense response to Gram-positive bacterium |
A | 0070062 | cellular_component | extracellular exosome |
A | 1904724 | cellular_component | tertiary granule lumen |
B | 0003796 | molecular_function | lysozyme activity |
B | 0005576 | cellular_component | extracellular region |
B | 0005615 | cellular_component | extracellular space |
B | 0006954 | biological_process | inflammatory response |
B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
B | 0019730 | biological_process | antimicrobial humoral response |
B | 0031640 | biological_process | killing of cells of another organism |
B | 0035578 | cellular_component | azurophil granule lumen |
B | 0035580 | cellular_component | specific granule lumen |
B | 0042742 | biological_process | defense response to bacterium |
B | 0042802 | molecular_function | identical protein binding |
B | 0050829 | biological_process | defense response to Gram-negative bacterium |
B | 0050830 | biological_process | defense response to Gram-positive bacterium |
B | 0070062 | cellular_component | extracellular exosome |
B | 1904724 | cellular_component | tertiary granule lumen |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | binding site for residue SO4 A 201 |
Chain | Residue |
A | ASN66 |
A | SER80 |
A | NA208 |
A | HOH307 |
A | HOH332 |
A | HOH347 |
B | THR43 |
B | HOH323 |
site_id | AC2 |
Number of Residues | 7 |
Details | binding site for residue SO4 A 202 |
Chain | Residue |
A | ASN88 |
A | HOH319 |
A | HOH323 |
A | HOH342 |
B | LYS1 |
B | VAL2 |
A | LYS69 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 203 |
Chain | Residue |
A | TYR20 |
A | LYS97 |
B | ARG5 |
B | LYS33 |
B | HOH329 |
site_id | AC4 |
Number of Residues | 2 |
Details | binding site for residue CL A 204 |
Chain | Residue |
A | ASN60 |
A | TRP64 |
site_id | AC5 |
Number of Residues | 2 |
Details | binding site for residue CL A 206 |
Chain | Residue |
A | ARG119 |
B | ARG122 |
site_id | AC6 |
Number of Residues | 2 |
Details | binding site for residue CL A 207 |
Chain | Residue |
A | GLY127 |
A | HOH389 |
site_id | AC7 |
Number of Residues | 6 |
Details | binding site for residue NA A 208 |
Chain | Residue |
A | ASN66 |
A | SO4201 |
A | HOH332 |
B | TYR45 |
B | HOH323 |
B | HOH403 |
site_id | AC8 |
Number of Residues | 2 |
Details | binding site for residue NA A 209 |
Chain | Residue |
A | HOH335 |
B | HOH330 |
site_id | AC9 |
Number of Residues | 3 |
Details | binding site for residue RU B 201 |
Chain | Residue |
B | ARG107 |
B | ARG113 |
B | GLN117 |
site_id | AD1 |
Number of Residues | 3 |
Details | binding site for residue RU B 202 |
Chain | Residue |
B | GLY127 |
B | HOH407 |
B | HOH425 |
site_id | AD2 |
Number of Residues | 2 |
Details | binding site for residue CL B 203 |
Chain | Residue |
B | TRP64 |
B | TRP109 |
site_id | AD3 |
Number of Residues | 5 |
Details | binding site for residue NA B 204 |
Chain | Residue |
B | ASN88 |
B | ALA90 |
B | ASP91 |
B | HOH345 |
B | HOH356 |
site_id | AD4 |
Number of Residues | 2 |
Details | binding site for residue NO3 B 205 |
Chain | Residue |
A | ARG122 |
B | ARG119 |
Functional Information from PROSITE/UniProt
site_id | PS00128 |
Number of Residues | 19 |
Details | GLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. ChlsCsaLlqdNIadavaC |
Chain | Residue | Details |
A | CYS77-CYS95 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: |
Chain | Residue | Details |
A | GLU35 | |
A | ASP53 | |
B | GLU35 | |
B | ASP53 |