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5LVJ

Hen Egg White Lysozyme co-crystallized with [H2Ind][trans-RuCl4(DMSO)(HInd)]

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue CL A 201
ChainResidue
ATHR43
ATHR43
AHOH394
AHOH394

site_idAC2
Number of Residues1
Detailsbinding site for residue CL A 202
ChainResidue
AASN65

site_idAC3
Number of Residues3
Detailsbinding site for residue CL A 203
ChainResidue
ASER24
AGLY26
AGLN121

site_idAC4
Number of Residues2
Detailsbinding site for residue CL A 204
ChainResidue
AASN113
ATYR23

site_idAC5
Number of Residues2
Detailsbinding site for residue CL A 205
ChainResidue
AILE88
ARU215

site_idAC6
Number of Residues6
Detailsbinding site for residue CL A 206
ChainResidue
AASN65
AGLY67
AARG68
ATHR69
ASER72
AHOH390

site_idAC7
Number of Residues5
Detailsbinding site for residue CL A 207
ChainResidue
AALA107
AVAL109
AACT213
AHOH309
AHOH359

site_idAC8
Number of Residues1
Detailsbinding site for residue CL A 208
ChainResidue
ALYS33

site_idAC9
Number of Residues6
Detailsbinding site for residue NA A 209
ChainResidue
ASER60
ACYS64
ASER72
AARG73
AHOH313
AHOH390

site_idAD1
Number of Residues5
Detailsbinding site for residue ACT A 210
ChainResidue
ASER72
AARG73
AASN74
AHOH313
AHOH328

site_idAD2
Number of Residues6
Detailsbinding site for residue ACT A 211
ChainResidue
ALYS1
ASER86
AASP87
AHOH305
AHOH308
AHOH386

site_idAD3
Number of Residues5
Detailsbinding site for residue ACT A 212
ChainResidue
ATHR89
AASN93
ALYS97
AHOH332
AHOH398

site_idAD4
Number of Residues8
Detailsbinding site for residue ACT A 213
ChainResidue
AGLN57
AILE58
AASN59
ATRP63
AALA107
ACL207
AHOH359
AHOH384

site_idAD5
Number of Residues4
Detailsbinding site for residue GOL A 214
ChainResidue
ATRP62
ATRP63
ALEU75
AASP101

site_idAD6
Number of Residues6
Detailsbinding site for residue RU A 215
ChainResidue
AARG14
AHIS15
AASP87
ACL205
AHOH305
AHOH430

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
ACYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU35
AASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AASP101

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
AGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASN46
AASP48
ASER50
AASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
AASN59

219140

PDB entries from 2024-05-01

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