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5LTJ

Crystal structure of the Prp43-ADP-BeF3 complex (in orthorhombic space group)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003723molecular_functionRNA binding
A0003724molecular_functionRNA helicase activity
A0004386molecular_functionhelicase activity
A0005524molecular_functionATP binding
A0005681cellular_componentspliceosomal complex
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
A1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue MG A 803
ChainResidue
ATHR126
AGLU219
AADP801
ABEF802
AHOH918
AHOH961
AHOH1051

site_idAC2
Number of Residues3
Detailsbinding site for residue MPD A 804
ChainResidue
AHOH1388
ATYR445
AGLU453

site_idAC3
Number of Residues9
Detailsbinding site for residue MPD A 805
ChainResidue
AARG152
AGLU222
AASN382
AGLU385
ATHR458
AARG464
ASO4812
AHOH965
AHOH1206

site_idAC4
Number of Residues1
Detailsbinding site for residue MPD A 806
ChainResidue
AARG625

site_idAC5
Number of Residues3
Detailsbinding site for residue MPD A 807
ChainResidue
AGLY370
AHOH939
AHOH1059

site_idAC6
Number of Residues2
Detailsbinding site for residue MPD A 808
ChainResidue
ALYS710
AGLN711

site_idAC7
Number of Residues6
Detailsbinding site for residue MPD A 809
ChainResidue
AGLU502
APHE661
AMET663
AGLN664
ALYS680
AHOH1019

site_idAC8
Number of Residues1
Detailsbinding site for residue MPD A 810
ChainResidue
ALEU518

site_idAC9
Number of Residues3
Detailsbinding site for residue MRD A 811
ChainResidue
ATYR135
APRO139
AHOH947

site_idAD1
Number of Residues5
Detailsbinding site for residue SO4 A 812
ChainResidue
AGLN404
ALYS405
AARG464
AMPD805
AHOH1025

site_idAD2
Number of Residues4
Detailsbinding site for residue CL A 813
ChainResidue
AARG153
AARG180
ATHR195
AARG201

site_idAD3
Number of Residues2
Detailsbinding site for residue CL A 815
ChainResidue
AGLY349
ATHR381

site_idAD4
Number of Residues2
Detailsbinding site for residue CL A 816
ChainResidue
AARG153
AHOH1481

site_idAD5
Number of Residues28
Detailsbinding site for residues ADP A 801 and BEF A 802
ChainResidue
AGLU120
ATHR121
AGLY122
ASER123
AGLY124
ALYS125
ATHR126
ATHR127
AARG162
AGLU219
ASER387
ATHR389
AARG432
AARG435
ATHR436
AMG803
AHOH918
AHOH928
AHOH961
AHOH969
AHOH980
AHOH1017
AHOH1051
AHOH1092
AHOH1207
AHOH1242
AHOH1266
AHOH1371

Functional Information from PROSITE/UniProt
site_idPS00690
Number of Residues10
DetailsDEAH_ATP_HELICASE DEAH-box subfamily ATP-dependent helicases signature. ScIILDEAHE
ChainResidueDetails
ASER213-GLU222

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PDB entries from 2024-06-12

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