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5LQT

RNA duplex has central consecutive GA pairs flanked by G-C basepairs

Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue CA A 101
ChainResidue
AG1
ACBV2
BC7

site_idAC2
Number of Residues5
Detailsbinding site for residue NA A 102
ChainResidue
ACBV2
AC3
AG4
AHOH228
BHOH207

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 103
ChainResidue
AHOH211
AHOH223
AHOH229
AHOH230
AHOH231
AHOH205

site_idAC4
Number of Residues6
Detailsbinding site for residue MG B 101
ChainResidue
AG5
AHOH208
AHOH224
BC10
BHOH213
BHOH214

site_idAC5
Number of Residues11
Detailsbinding site for Di-nucleotide G B 1 and CBV B 2
ChainResidue
AG1
AG9
AC10
AHOH214
BC3
BC10
BHOH202
BHOH204
BHOH206
BHOH212
BHOH214

site_idAC6
Number of Residues10
Detailsbinding site for Di-nucleotide CBV B 2 and C B 3
ChainResidue
AG8
AG9
AC10
AHOH214
BG1
BG4
BHOH202
BHOH206
BHOH212
BHOH217

site_idAC7
Number of Residues7
Detailsbinding site for Di-nucleotide G B 5 and 6MZ B 6
ChainResidue
AG5
A6MZ6
AC7
BG4
BC7
BHOH210
BHOH216

site_idAC8
Number of Residues9
Detailsbinding site for Di-nucleotide 6MZ B 6 and C B 7
ChainResidue
AG4
AG5
A6MZ6
AC10
ACA101
BG5
BG8
BHOH210
BHOH211

220472

PDB entries from 2024-05-29

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