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5GVN

Plasmodium vivax SHMT bound with PLP-glycine and GS653

Functional Information from GO Data
ChainGOidnamespacecontents
A0000900molecular_functionmRNA regulatory element binding translation repressor activity
A0004372molecular_functionglycine hydroxymethyltransferase activity
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006565biological_processL-serine catabolic process
A0008270molecular_functionzinc ion binding
A0009113biological_processpurine nucleobase biosynthetic process
A0016740molecular_functiontransferase activity
A0017148biological_processnegative regulation of translation
A0019264biological_processglycine biosynthetic process from serine
A0030170molecular_functionpyridoxal phosphate binding
A0035999biological_processtetrahydrofolate interconversion
A0042803molecular_functionprotein homodimerization activity
A0046655biological_processfolic acid metabolic process
A0048027molecular_functionmRNA 5'-UTR binding
A0050897molecular_functioncobalt ion binding
A0051289biological_processprotein homotetramerization
A0070905molecular_functionserine binding
A1990830biological_processcellular response to leukemia inhibitory factor
B0000900molecular_functionmRNA regulatory element binding translation repressor activity
B0004372molecular_functionglycine hydroxymethyltransferase activity
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006565biological_processL-serine catabolic process
B0008270molecular_functionzinc ion binding
B0009113biological_processpurine nucleobase biosynthetic process
B0016740molecular_functiontransferase activity
B0017148biological_processnegative regulation of translation
B0019264biological_processglycine biosynthetic process from serine
B0030170molecular_functionpyridoxal phosphate binding
B0035999biological_processtetrahydrofolate interconversion
B0042803molecular_functionprotein homodimerization activity
B0046655biological_processfolic acid metabolic process
B0048027molecular_functionmRNA 5'-UTR binding
B0050897molecular_functioncobalt ion binding
B0051289biological_processprotein homotetramerization
B0070905molecular_functionserine binding
B1990830biological_processcellular response to leukemia inhibitory factor
C0000900molecular_functionmRNA regulatory element binding translation repressor activity
C0004372molecular_functionglycine hydroxymethyltransferase activity
C0005634cellular_componentnucleus
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006565biological_processL-serine catabolic process
C0008270molecular_functionzinc ion binding
C0009113biological_processpurine nucleobase biosynthetic process
C0016740molecular_functiontransferase activity
C0017148biological_processnegative regulation of translation
C0019264biological_processglycine biosynthetic process from serine
C0030170molecular_functionpyridoxal phosphate binding
C0035999biological_processtetrahydrofolate interconversion
C0042803molecular_functionprotein homodimerization activity
C0046655biological_processfolic acid metabolic process
C0048027molecular_functionmRNA 5'-UTR binding
C0050897molecular_functioncobalt ion binding
C0051289biological_processprotein homotetramerization
C0070905molecular_functionserine binding
C1990830biological_processcellular response to leukemia inhibitory factor
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue PLG A 501
ChainResidue
ASER34
AHIS236
ALYS237
AARG371
AHOH639
AHOH653
BTYR54
BGLU56
BTYR64
BGLY271
BGLY272
ASER100
BHOH665
AGLY101
ASER102
AHIS129
ATYR182
ATHR183
AASP208
AHIS211

site_idAC2
Number of Residues13
Detailsbinding site for residue G6F A 502
ChainResidue
AGLU56
ATYR63
ATYR64
AHOH632
BLEU124
BGLY128
BHIS129
BTHR183
BASN354
BASN356
BTHR357
BPRO367
BARG371

site_idAC3
Number of Residues4
Detailsbinding site for residue CL A 503
ChainResidue
AASN276
ALYS277
BASN276
BLYS277

site_idAC4
Number of Residues19
Detailsbinding site for residue PLG B 501
ChainResidue
ATYR54
AGLU56
ATYR64
AGLY271
AGLY272
AHOH623
BSER34
BSER100
BGLY101
BSER102
BHIS129
BTHR183
BASP208
BHIS211
BHIS236
BLYS237
BARG371
BHOH626
BHOH673

site_idAC5
Number of Residues14
Detailsbinding site for residue G6F B 502
ChainResidue
ALEU124
AGLY128
AHIS129
ALEU130
ATHR183
AASN354
AASN356
ATHR357
AARG371
BGLU56
BTYR63
BTYR64
BHOH623
BHOH714

site_idAC6
Number of Residues19
Detailsbinding site for residue PLG C 501
ChainResidue
CSER34
CTYR54
CGLU56
CTYR64
CSER100
CGLY101
CSER102
CHIS129
CTHR183
CASP208
CHIS211
CTHR234
CHIS236
CLYS237
CGLY271
CGLY272
CARG371
CHOH627
CHOH699

site_idAC7
Number of Residues14
Detailsbinding site for residue G6F C 502
ChainResidue
CASN356
CTHR357
CPRO367
CHOH602
CGLU56
CTYR63
CTYR64
CLEU124
CGLY128
CHIS129
CTHR183
CSER184
CASN354
CLYS355

site_idAC8
Number of Residues4
Detailsbinding site for residue CL C 503
ChainResidue
CASN276
CASN276
CLYS277
CLYS277

220113

PDB entries from 2024-05-22

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