5FT6
Crystal structure of the cysteine desulfurase CsdA (S-sulfonic acid) from Escherichia coli at 2.050 Angstroem resolution
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000096 | biological_process | sulfur amino acid metabolic process |
A | 0003824 | molecular_function | catalytic activity |
A | 0005515 | molecular_function | protein binding |
A | 0006534 | biological_process | cysteine metabolic process |
A | 0008826 | molecular_function | cysteine sulfinate desulfinase activity |
A | 0009000 | molecular_function | selenocysteine lyase activity |
A | 0016226 | biological_process | iron-sulfur cluster assembly |
A | 0016261 | biological_process | selenocysteine catabolic process |
A | 0016740 | molecular_function | transferase activity |
A | 0016783 | molecular_function | sulfurtransferase activity |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016829 | molecular_function | lyase activity |
A | 0019448 | biological_process | L-cysteine catabolic process |
A | 0030170 | molecular_function | pyridoxal phosphate binding |
A | 0031071 | molecular_function | cysteine desulfurase activity |
A | 0072348 | biological_process | sulfur compound transport |
A | 1990221 | cellular_component | L-cysteine desulfurase complex |
B | 0000096 | biological_process | sulfur amino acid metabolic process |
B | 0003824 | molecular_function | catalytic activity |
B | 0005515 | molecular_function | protein binding |
B | 0006534 | biological_process | cysteine metabolic process |
B | 0008826 | molecular_function | cysteine sulfinate desulfinase activity |
B | 0009000 | molecular_function | selenocysteine lyase activity |
B | 0016226 | biological_process | iron-sulfur cluster assembly |
B | 0016261 | biological_process | selenocysteine catabolic process |
B | 0016740 | molecular_function | transferase activity |
B | 0016783 | molecular_function | sulfurtransferase activity |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016829 | molecular_function | lyase activity |
B | 0019448 | biological_process | L-cysteine catabolic process |
B | 0030170 | molecular_function | pyridoxal phosphate binding |
B | 0031071 | molecular_function | cysteine desulfurase activity |
B | 0072348 | biological_process | sulfur compound transport |
B | 1990221 | cellular_component | L-cysteine desulfurase complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 501 |
Chain | Residue |
A | ALA47 |
A | THR62 |
A | HOH2439 |
site_id | AC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL A 502 |
Chain | Residue |
A | GOL505 |
A | HOH2205 |
A | GLY109 |
A | GLY134 |
A | LYS136 |
A | PRO316 |
A | ASP393 |
A | GLU397 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 503 |
Chain | Residue |
A | ARG60 |
A | ARG64 |
A | LYS71 |
A | GLU287 |
site_id | AC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 504 |
Chain | Residue |
A | ASP310 |
A | ALA313 |
A | HOH2349 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 505 |
Chain | Residue |
A | LYS136 |
A | LYS314 |
A | ARG315 |
A | GOL502 |
A | HOH2196 |
A | HOH2355 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 506 |
Chain | Residue |
A | TYR65 |
A | ARG69 |
A | TRP86 |
A | HOH2111 |
A | HOH2112 |
A | HOH2116 |
site_id | AC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG A 507 |
Chain | Residue |
A | MET1 |
A | ILE157 |
A | THR158 |
A | PRO159 |
A | ALA189 |
site_id | AC8 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE PLP A 1222 |
Chain | Residue |
A | THR90 |
A | THR91 |
A | HIS119 |
A | ASN171 |
A | ASP196 |
A | ALA198 |
A | GLN199 |
A | SER219 |
A | HIS221 |
A | LYS222 |
A | HOH2140 |
A | HOH2143 |
A | HOH2441 |
B | THR273 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL B 501 |
Chain | Residue |
B | TYR65 |
B | ARG69 |
B | TRP86 |
B | TRP267 |
B | HOH2068 |
B | HOH2247 |
site_id | BC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL B 502 |
Chain | Residue |
A | HOH2436 |
B | LEU307 |
B | LYS382 |
B | ASP386 |
B | VAL389 |
B | HOH2212 |
B | HOH2248 |
site_id | BC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL B 503 |
Chain | Residue |
B | THR273 |
B | VAL276 |
B | HOH2249 |
B | HOH2250 |
B | HOH2251 |
site_id | BC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG B 504 |
Chain | Residue |
A | HOH2385 |
B | THR306 |
B | GLU309 |
B | ASP310 |
B | ASP325 |
site_id | BC4 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE PLP B 1222 |
Chain | Residue |
A | THR273 |
A | HOH2315 |
A | HOH2316 |
A | HOH2319 |
B | THR90 |
B | THR91 |
B | HIS119 |
B | ASN171 |
B | ASP196 |
B | ALA198 |
B | GLN199 |
B | SER219 |
B | HIS221 |
B | LYS222 |
B | HOH2088 |
Functional Information from PROSITE/UniProt
site_id | PS00595 |
Number of Residues | 20 |
Details | AA_TRANSFER_CLASS_5 Aminotransferases class-V pyridoxal-phosphate attachment site. IDFYafSGHKlygpt.GiGvL |
Chain | Residue | Details |
A | ILE213-LEU232 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Cysteine persulfide intermediate => ECO:0000305|PubMed:10739946 |
Chain | Residue | Details |
A | CSU358 | |
B | CSU358 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | MOD_RES: N6-(pyridoxal phosphate)lysine => ECO:0000250 |
Chain | Residue | Details |
A | LYS222 | |
B | LYS222 |