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5AKA

EM structure of ribosome-SRP-FtsY complex in closed state

Functional Information from GO Data
ChainGOidnamespacecontents
00000027biological_processribosomal large subunit assembly
00000302biological_processresponse to reactive oxygen species
00002181biological_processcytoplasmic translation
00003735molecular_functionstructural constituent of ribosome
00005515molecular_functionprotein binding
00005737cellular_componentcytoplasm
00005829cellular_componentcytosol
00005840cellular_componentribosome
00006412biological_processtranslation
00009314biological_processresponse to radiation
00015934cellular_componentlarge ribosomal subunit
00022625cellular_componentcytosolic large ribosomal subunit
01990904cellular_componentribonucleoprotein complex
10000027biological_processribosomal large subunit assembly
10000049molecular_functiontRNA binding
10002181biological_processcytoplasmic translation
10003735molecular_functionstructural constituent of ribosome
10005737cellular_componentcytoplasm
10005829cellular_componentcytosol
10005840cellular_componentribosome
10006412biological_processtranslation
10022625cellular_componentcytosolic large ribosomal subunit
10043229cellular_componentintracellular organelle
10046677biological_processresponse to antibiotic
11990904cellular_componentribonucleoprotein complex
20002181biological_processcytoplasmic translation
20003735molecular_functionstructural constituent of ribosome
20005515molecular_functionprotein binding
20005737cellular_componentcytoplasm
20005840cellular_componentribosome
20006412biological_processtranslation
20022625cellular_componentcytosolic large ribosomal subunit
21990904cellular_componentribonucleoprotein complex
30002181biological_processcytoplasmic translation
30003735molecular_functionstructural constituent of ribosome
30005737cellular_componentcytoplasm
30005840cellular_componentribosome
30006412biological_processtranslation
30022625cellular_componentcytosolic large ribosomal subunit
31990904cellular_componentribonucleoprotein complex
40002181biological_processcytoplasmic translation
40003735molecular_functionstructural constituent of ribosome
40005737cellular_componentcytoplasm
40005840cellular_componentribosome
40006412biological_processtranslation
40022625cellular_componentcytosolic large ribosomal subunit
40043229cellular_componentintracellular organelle
41990904cellular_componentribonucleoprotein complex
50003924molecular_functionGTPase activity
50005525molecular_functionGTP binding
50006614biological_processSRP-dependent cotranslational protein targeting to membrane
50008312molecular_function7S RNA binding
50048500cellular_componentsignal recognition particle
C0000027biological_processribosomal large subunit assembly
C0002181biological_processcytoplasmic translation
C0003723molecular_functionRNA binding
C0003735molecular_functionstructural constituent of ribosome
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005840cellular_componentribosome
C0006412biological_processtranslation
C0008270molecular_functionzinc ion binding
C0015934cellular_componentlarge ribosomal subunit
C0016740molecular_functiontransferase activity
C0019843molecular_functionrRNA binding
C0022625cellular_componentcytosolic large ribosomal subunit
C0032297biological_processnegative regulation of DNA-templated DNA replication initiation
C1990082cellular_componentDnaA-L2 complex
C1990904cellular_componentribonucleoprotein complex
D0000027biological_processribosomal large subunit assembly
D0002181biological_processcytoplasmic translation
D0003735molecular_functionstructural constituent of ribosome
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0005840cellular_componentribosome
D0006412biological_processtranslation
D0019843molecular_functionrRNA binding
D0022625cellular_componentcytosolic large ribosomal subunit
D1990904cellular_componentribonucleoprotein complex
E0001070molecular_functionRNA-binding transcription regulator activity
E0002181biological_processcytoplasmic translation
E0003677molecular_functionDNA binding
E0003735molecular_functionstructural constituent of ribosome
E0005515molecular_functionprotein binding
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0005840cellular_componentribosome
E0006353biological_processDNA-templated transcription termination
E0006412biological_processtranslation
E0006417biological_processregulation of translation
E0015934cellular_componentlarge ribosomal subunit
E0017148biological_processnegative regulation of translation
E0019843molecular_functionrRNA binding
E0022625cellular_componentcytosolic large ribosomal subunit
E0030371molecular_functiontranslation repressor activity
E0031555biological_processtranscriptional attenuation
E0042255biological_processribosome assembly
E0045892biological_processnegative regulation of DNA-templated transcription
E0046677biological_processresponse to antibiotic
E0048027molecular_functionmRNA 5'-UTR binding
E0060698molecular_functionendoribonuclease inhibitor activity
E1990904cellular_componentribonucleoprotein complex
E2000766biological_processnegative regulation of cytoplasmic translation
F0000049molecular_functiontRNA binding
F0002181biological_processcytoplasmic translation
F0003723molecular_functionRNA binding
F0003735molecular_functionstructural constituent of ribosome
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0008097molecular_function5S rRNA binding
F0019843molecular_functionrRNA binding
F0022625cellular_componentcytosolic large ribosomal subunit
F1990904cellular_componentribonucleoprotein complex
G0000027biological_processribosomal large subunit assembly
G0002181biological_processcytoplasmic translation
G0003735molecular_functionstructural constituent of ribosome
G0005737cellular_componentcytoplasm
G0005829cellular_componentcytosol
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0019843molecular_functionrRNA binding
G0022625cellular_componentcytosolic large ribosomal subunit
G0046677biological_processresponse to antibiotic
G0070180molecular_functionlarge ribosomal subunit rRNA binding
G1990904cellular_componentribonucleoprotein complex
H0002181biological_processcytoplasmic translation
H0003735molecular_functionstructural constituent of ribosome
H0005515molecular_functionprotein binding
H0005737cellular_componentcytoplasm
H0005829cellular_componentcytosol
H0005840cellular_componentribosome
H0006412biological_processtranslation
H0019843molecular_functionrRNA binding
H0022625cellular_componentcytosolic large ribosomal subunit
H0070180molecular_functionlarge ribosomal subunit rRNA binding
H1990904cellular_componentribonucleoprotein complex
I0000027biological_processribosomal large subunit assembly
I0002181biological_processcytoplasmic translation
I0003735molecular_functionstructural constituent of ribosome
I0005515molecular_functionprotein binding
I0005737cellular_componentcytoplasm
I0005829cellular_componentcytosol
I0005840cellular_componentribosome
I0006412biological_processtranslation
I0006415biological_processtranslational termination
I0015968biological_processstringent response
I0019843molecular_functionrRNA binding
I0022625cellular_componentcytosolic large ribosomal subunit
I0070180molecular_functionlarge ribosomal subunit rRNA binding
I1990904cellular_componentribonucleoprotein complex
J0002181biological_processcytoplasmic translation
J0003729molecular_functionmRNA binding
J0003735molecular_functionstructural constituent of ribosome
J0005737cellular_componentcytoplasm
J0005829cellular_componentcytosol
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0008270molecular_functionzinc ion binding
J0017148biological_processnegative regulation of translation
J0022625cellular_componentcytosolic large ribosomal subunit
J0043229cellular_componentintracellular organelle
J0048027molecular_functionmRNA 5'-UTR binding
J0070180molecular_functionlarge ribosomal subunit rRNA binding
J1990904cellular_componentribonucleoprotein complex
K0002181biological_processcytoplasmic translation
K0003735molecular_functionstructural constituent of ribosome
K0005515molecular_functionprotein binding
K0005737cellular_componentcytoplasm
K0005829cellular_componentcytosol
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0015934cellular_componentlarge ribosomal subunit
K0019843molecular_functionrRNA binding
K0022625cellular_componentcytosolic large ribosomal subunit
K0070180molecular_functionlarge ribosomal subunit rRNA binding
K1990904cellular_componentribonucleoprotein complex
L0002181biological_processcytoplasmic translation
L0003735molecular_functionstructural constituent of ribosome
L0005515molecular_functionprotein binding
L0005737cellular_componentcytoplasm
L0005840cellular_componentribosome
L0006412biological_processtranslation
L0015934cellular_componentlarge ribosomal subunit
L0019843molecular_functionrRNA binding
L0022625cellular_componentcytosolic large ribosomal subunit
L1990904cellular_componentribonucleoprotein complex
M0000027biological_processribosomal large subunit assembly
M0000049molecular_functiontRNA binding
M0002181biological_processcytoplasmic translation
M0003735molecular_functionstructural constituent of ribosome
M0005737cellular_componentcytoplasm
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0019843molecular_functionrRNA binding
M0022625cellular_componentcytosolic large ribosomal subunit
M1990904cellular_componentribonucleoprotein complex
N0000027biological_processribosomal large subunit assembly
N0002181biological_processcytoplasmic translation
N0003735molecular_functionstructural constituent of ribosome
N0005515molecular_functionprotein binding
N0005737cellular_componentcytoplasm
N0005829cellular_componentcytosol
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0022625cellular_componentcytosolic large ribosomal subunit
N1990904cellular_componentribonucleoprotein complex
O0002181biological_processcytoplasmic translation
O0003735molecular_functionstructural constituent of ribosome
O0005737cellular_componentcytoplasm
O0005829cellular_componentcytosol
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0008097molecular_function5S rRNA binding
O0019843molecular_functionrRNA binding
O0022625cellular_componentcytosolic large ribosomal subunit
O0043229cellular_componentintracellular organelle
O1990904cellular_componentribonucleoprotein complex
P0000027biological_processribosomal large subunit assembly
P0002181biological_processcytoplasmic translation
P0003735molecular_functionstructural constituent of ribosome
P0005737cellular_componentcytoplasm
P0005829cellular_componentcytosol
P0005840cellular_componentribosome
P0006412biological_processtranslation
P0019843molecular_functionrRNA binding
P0022625cellular_componentcytosolic large ribosomal subunit
P0070180molecular_functionlarge ribosomal subunit rRNA binding
P1990904cellular_componentribonucleoprotein complex
Q0000900molecular_functionmRNA regulatory element binding translation repressor activity
Q0002181biological_processcytoplasmic translation
Q0003729molecular_functionmRNA binding
Q0003735molecular_functionstructural constituent of ribosome
Q0005737cellular_componentcytoplasm
Q0005829cellular_componentcytosol
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0017148biological_processnegative regulation of translation
Q0019843molecular_functionrRNA binding
Q0022625cellular_componentcytosolic large ribosomal subunit
Q0070180molecular_functionlarge ribosomal subunit rRNA binding
Q1990904cellular_componentribonucleoprotein complex
R0002181biological_processcytoplasmic translation
R0003723molecular_functionRNA binding
R0003735molecular_functionstructural constituent of ribosome
R0005737cellular_componentcytoplasm
R0005829cellular_componentcytosol
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0019843molecular_functionrRNA binding
R0022625cellular_componentcytosolic large ribosomal subunit
R0043229cellular_componentintracellular organelle
R1990904cellular_componentribonucleoprotein complex
S0002181biological_processcytoplasmic translation
S0003735molecular_functionstructural constituent of ribosome
S0005515molecular_functionprotein binding
S0005737cellular_componentcytoplasm
S0005829cellular_componentcytosol
S0005840cellular_componentribosome
S0006412biological_processtranslation
S0015934cellular_componentlarge ribosomal subunit
S0019843molecular_functionrRNA binding
S0022625cellular_componentcytosolic large ribosomal subunit
S0042255biological_processribosome assembly
S0042256biological_processcytosolic ribosome assembly
S0046677biological_processresponse to antibiotic
S0070180molecular_functionlarge ribosomal subunit rRNA binding
S1902626biological_processassembly of large subunit precursor of preribosome
S1990904cellular_componentribonucleoprotein complex
T0000027biological_processribosomal large subunit assembly
T0002181biological_processcytoplasmic translation
T0003735molecular_functionstructural constituent of ribosome
T0005515molecular_functionprotein binding
T0005737cellular_componentcytoplasm
T0005840cellular_componentribosome
T0006412biological_processtranslation
T0019843molecular_functionrRNA binding
T0022625cellular_componentcytosolic large ribosomal subunit
T1990904cellular_componentribonucleoprotein complex
U0000027biological_processribosomal large subunit assembly
U0002181biological_processcytoplasmic translation
U0003723molecular_functionRNA binding
U0003735molecular_functionstructural constituent of ribosome
U0005515molecular_functionprotein binding
U0005737cellular_componentcytoplasm
U0005829cellular_componentcytosol
U0005840cellular_componentribosome
U0006412biological_processtranslation
U0019843molecular_functionrRNA binding
U0022625cellular_componentcytosolic large ribosomal subunit
U0070180molecular_functionlarge ribosomal subunit rRNA binding
U1990904cellular_componentribonucleoprotein complex
V0000027biological_processribosomal large subunit assembly
V0002181biological_processcytoplasmic translation
V0003723molecular_functionRNA binding
V0003735molecular_functionstructural constituent of ribosome
V0005737cellular_componentcytoplasm
V0005829cellular_componentcytosol
V0005840cellular_componentribosome
V0006412biological_processtranslation
V0008097molecular_function5S rRNA binding
V0009314biological_processresponse to radiation
V0017148biological_processnegative regulation of translation
V0019843molecular_functionrRNA binding
V0022625cellular_componentcytosolic large ribosomal subunit
V1990904cellular_componentribonucleoprotein complex
W0000027biological_processribosomal large subunit assembly
W0000049molecular_functiontRNA binding
W0001558biological_processregulation of cell growth
W0002181biological_processcytoplasmic translation
W0003735molecular_functionstructural constituent of ribosome
W0005515molecular_functionprotein binding
W0005737cellular_componentcytoplasm
W0005840cellular_componentribosome
W0006412biological_processtranslation
W0019843molecular_functionrRNA binding
W0022625cellular_componentcytosolic large ribosomal subunit
W0042256biological_processcytosolic ribosome assembly
W0043022molecular_functionribosome binding
W0090070biological_processpositive regulation of ribosome biogenesis
W1902626biological_processassembly of large subunit precursor of preribosome
W1990904cellular_componentribonucleoprotein complex
X0000027biological_processribosomal large subunit assembly
X0002181biological_processcytoplasmic translation
X0003735molecular_functionstructural constituent of ribosome
X0005737cellular_componentcytoplasm
X0005840cellular_componentribosome
X0006412biological_processtranslation
X0019843molecular_functionrRNA binding
X0022625cellular_componentcytosolic large ribosomal subunit
X1990904cellular_componentribonucleoprotein complex
Y0000027biological_processribosomal large subunit assembly
Y0002181biological_processcytoplasmic translation
Y0003735molecular_functionstructural constituent of ribosome
Y0005737cellular_componentcytoplasm
Y0005840cellular_componentribosome
Y0006412biological_processtranslation
Y0015934cellular_componentlarge ribosomal subunit
Y0022625cellular_componentcytosolic large ribosomal subunit
Y1990904cellular_componentribonucleoprotein complex
Z0002181biological_processcytoplasmic translation
Z0003735molecular_functionstructural constituent of ribosome
Z0005737cellular_componentcytoplasm
Z0005829cellular_componentcytosol
Z0005840cellular_componentribosome
Z0006412biological_processtranslation
Z0006413biological_processtranslational initiation
Z0008270molecular_functionzinc ion binding
Z0019843molecular_functionrRNA binding
Z0022625cellular_componentcytosolic large ribosomal subunit
Z0046872molecular_functionmetal ion binding
Z1904689biological_processnegative regulation of cytoplasmic translational initiation
Z1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2905
ChainResidue
BA802
BHOH3101
BHOH3102
BHOH3103
BHOH3104
BHOH3105

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2906
ChainResidue
BHOH3109
BHOH3110
BHOH3111
BHOH3106
BHOH3107
BHOH3108

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2907
ChainResidue
BHOH3112
BHOH3113
EHOH301
EHOH302
EHOH303
EHOH304

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2908
ChainResidue
BC560
BHOH3114
BHOH3115
BHOH3116
BHOH3117
BHOH3118
BHOH3119

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2909
ChainResidue
BA783
BG784
BA2589
BHOH3120
BHOH3121
CHOH301

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2910
ChainResidue
BG2588
BHOH3122
BHOH3123
BHOH3124
BHOH3125
BHOH3126

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2911
ChainResidue
BC1646
BU1647
BHOH3127
BHOH3128
BHOH3129
BHOH3130
BHOH3131

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2912
ChainResidue
BA2518
BA2541
BHOH3132
BHOH3133
BHOH3134
BHOH3135
BHOH3136

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2913
ChainResidue
BU296
BG338
BHOH3137
BHOH3138
BHOH3139
BHOH3140
BHOH3141

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2914
ChainResidue
BU999
BC1153
BHOH3142
BHOH3143
BHOH3144
BHOH3145

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2915
ChainResidue
BG784
BG2588
BHOH3146
BHOH3147
BHOH3148
BHOH3149

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2916
ChainResidue
BU2074
BHOH3150
BHOH3151
BHOH3152
BHOH3153
BHOH3154

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2917
ChainResidue
BG1333
BHOH3155
BHOH3156
BHOH3157
BHOH3158
BHOH3159

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2918
ChainResidue
BHOH3160
BHOH3161
BHOH3162
BHOH3163
BHOH3164
BHOH3165

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2919
ChainResidue
BC2248
BU2249
BHOH3166
BHOH3167
BHOH3168
BHOH3169

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2920
ChainResidue
BHOH3174
BG1828
BHOH3170
BHOH3171
BHOH3172
BHOH3173

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2921
ChainResidue
BHOH3175
BHOH3176
BHOH3177
BHOH3178
BHOH3179
BHOH3180

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2922
ChainResidue
BHOH3181
BHOH3182
BHOH3183
BHOH3184
BHOH3185
BHOH3186

site_idCC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2923
ChainResidue
BHOH3187
BHOH3188
BHOH3189
BHOH3190
BHOH3191
BHOH3192

site_idCC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2924
ChainResidue
BHOH3193
BHOH3194
BHOH3195
BHOH3196
BHOH3197
BHOH3198

site_idCC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2925
ChainResidue
BG1187
BHOH3199
BHOH3200
BHOH3201
BHOH3202
BHOH3203

site_idCC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2926
ChainResidue
BG1968
BC2591
BG2592
BHOH3204
BHOH3205
BHOH3206
BHOH3207

site_idCC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2927
ChainResidue
BA1970
BHOH3208
BHOH3209
BHOH3210
BHOH3211
BHOH3212

site_idCC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2928
ChainResidue
BC948
BG962
BU963
BHOH3213
BHOH3214
BHOH3215

site_idCC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2929
ChainResidue
BU1313
BHOH3216
BHOH3217
BHOH3218
BHOH3219
BHOH3220

site_idCC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2930
ChainResidue
BA945
BHOH3221
BHOH3222
BHOH3223
BHOH3224
BHOH3225

site_idCC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2931
ChainResidue
BHOH3226
BHOH3227
BHOH3228
BHOH3229
BHOH3230
BHOH3231

site_idDC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2932
ChainResidue
BG1358
BG1371
BHOH3232
BHOH3233
BHOH3234
BHOH3235

site_idDC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2933
ChainResidue
BG450
BHOH3236
BHOH3237
BHOH3238
BHOH3239
BHOH3240

site_idDC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2934
ChainResidue
BC418
BU419
BHOH3241
BHOH3242
BHOH3243
BHOH3244
BHOH3245

site_idDC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2935
ChainResidue
BHOH3246
BHOH3247
BHOH3248
BHOH3249
BHOH3250
BHOH3251

site_idDC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2936
ChainResidue
BU746
BHOH3252
BHOH3253
BHOH3254
BHOH3255
BHOH3256

site_idDC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2937
ChainResidue
BHOH3257
BHOH3258
BHOH3259
BHOH3260
BHOH3261
BHOH3262

site_idDC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2938
ChainResidue
BA2711
BG2714
BHOH3263
BHOH3264
BHOH3265
NHOH201

site_idDC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2939
ChainResidue
BC2499
BHOH3266
BHOH3267
BHOH3268
BHOH3269
BHOH3270

site_idDC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2940
ChainResidue
BU1394
BC1604
BHOH3271
BHOH3272
BHOH3273
BHOH3274

site_idEC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2941
ChainResidue
BA1395
BA1603
BC1604
BHOH3275
BHOH3276
BHOH3277

site_idEC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2942
ChainResidue
BC1454
BG1455
BHOH3278
BHOH3279
BHOH3280
BHOH3281
BHOH3282

site_idEC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2943
ChainResidue
BG450
BA453
BHOH3283
BHOH3284
BHOH3285
BHOH3286

site_idEC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2944
ChainResidue
BG1271
BA1272
BU1647
BU1648
BHOH3287
BHOH3288

site_idEC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2945
ChainResidue
BC944
BA945
BC946
BHOH3289
BHOH3290
BHOH3291
BHOH3292

site_idEC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2946
ChainResidue
BG2304
BHOH3293
BHOH3294
BHOH3295
BHOH3296
BHOH3297

site_idEC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2947
ChainResidue
BHOH3298
BHOH3299
BHOH3300
BHOH3301
BHOH3302
BHOH3303

site_idEC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2948
ChainResidue
BU120
BHOH3304
BHOH3305
BHOH3306
BHOH3307
BHOH3308

site_idEC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2949
ChainResidue
BU120
BHOH3309
BHOH3310
BHOH3311
BHOH3312
BHOH3313

site_idFC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2950
ChainResidue
BA526
BC527
BHOH3314
BHOH3315
BHOH3316
BHOH3317

site_idFC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2951
ChainResidue
BG536
BHOH3318
BHOH3319
BHOH3320
BHOH3321
BHOH3322

site_idFC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2952
ChainResidue
BU567
BHOH3323
BHOH3324
BHOH3325
BHOH3326
LHOH201

site_idFC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2953
ChainResidue
BHOH3327
BHOH3328
BHOH3329
BHOH3330
BHOH3331
LHOH202

site_idFC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2954
ChainResidue
BA574
BHOH3332
BHOH3333
BHOH3334
BHOH3335
BHOH3336

site_idFC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2955
ChainResidue
BHOH3337
BHOH3338
BHOH3339
BHOH3340
BHOH3341
EHOH305

site_idFC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2956
ChainResidue
BHOH3342
BHOH3343
BHOH3344
BHOH3345
BHOH3346
BHOH3347

site_idFC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2957
ChainResidue
BHOH3348
BHOH3349
BHOH3350
BHOH3351
BHOH3352
BHOH3353

site_idFC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2958
ChainResidue
BA621
BG622
BHOH3354
BHOH3355
BHOH3356
BHOH3357

site_idGC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2959
ChainResidue
BG733
BA761
BHOH3358
BHOH3359
BHOH3360
BHOH3361

site_idGC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2960
ChainResidue
BA751
BA1614
BHOH3362
BHOH3363
BHOH3364
BHOH3365

site_idGC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2961
ChainResidue
BHOH3366
BHOH3367
BHOH3368
BHOH3369
BHOH3370
BHOH3371

site_idGC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2962
ChainResidue
BA800
BHOH3372
BHOH3373
BHOH3374
BHOH3375
BHOH3376

site_idGC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2963
ChainResidue
BU810
BA1253
BHOH3377
BHOH3378
BHOH3379
BHOH3380

site_idGC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2964
ChainResidue
BU826
BU827
BG2429
BA2430
BHOH3381
BHOH3382
BHOH3383

site_idGC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2965
ChainResidue
BA1156
BHOH3384
BHOH3385
BHOH3386
BHOH3387
BHOH3388

site_idGC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2966
ChainResidue
BA1268
BC2006
BHOH3389
BHOH3390
BHOH3391
BHOH3392

site_idGC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2967
ChainResidue
BA1269
BA2005
BC2006
BHOH3393
BHOH3394
BHOH3395
BHOH3396

site_idHC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2968
ChainResidue
BC1376
BHOH3397
BHOH3398
BHOH3399
BHOH3400
BHOH3401
BHOH3402

site_idHC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2969
ChainResidue
BA1664
BG1667
BHOH3403
BHOH3404
BHOH3405
BHOH3406
BHOH3407

site_idHC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2970
ChainResidue
BHOH3408
BHOH3409
BHOH3410
BHOH3411
BHOH3412
BHOH3413

site_idHC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2971
ChainResidue
BC1670
BU1671
BHOH3414
BHOH3415
BHOH3416
BHOH3417

site_idHC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2972
ChainResidue
BA1678
BHOH3418
BHOH3419
BHOH3420
BHOH3421
BHOH3422

site_idHC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2973
ChainResidue
BC1774
BHOH3423
BHOH3424
BHOH3425
BHOH3426
BHOH3427

site_idHC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2974
ChainResidue
BG1776
BHOH3428
BHOH3429
BHOH3430
BHOH3431
BHOH3432

site_idHC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2975
ChainResidue
BC2025
BHOH3433
BHOH3434
BHOH3435
BHOH3436
BHOH3437

site_idHC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2976
ChainResidue
BU2028
BA2033
BHOH3438
BHOH3439
BHOH3440
BHOH3441

site_idIC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2977
ChainResidue
BG2056
BG2057
BHOH3442
BHOH3443
BHOH3444
BHOH3445

site_idIC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2978
ChainResidue
BA2060
BG2061
BG2502
BHOH3446
BHOH3447
BHOH3448
BHOH3449

site_idIC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2979
ChainResidue
BA2062
BHOH3450
BHOH3451
BHOH3452
BHOH3453
BHOH3454

site_idIC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2980
ChainResidue
BA2268
BG2269
BHOH3455
BHOH3456
BHOH3457
BHOH3458

site_idIC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2981
ChainResidue
BA2270
BHOH3459
BHOH3460
BHOH3461
BHOH3462
BHOH3463

site_idIC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2982
ChainResidue
BHOH3464
BHOH3465
BHOH3466
BHOH3467
BHOH3468
BHOH3469

site_idIC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2983
ChainResidue
BHOH3470
BHOH3471
BHOH3472
BHOH3473
BHOH3474
BHOH3475

site_idIC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2984
ChainResidue
BHOH3476
BHOH3477
BHOH3478
BHOH3479
BHOH3480
BHOH3481

site_idIC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2985
ChainResidue
BC2579
BC2611
BHOH3482
BHOH3483
BHOH3484
BHOH3485

site_idJC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2986
ChainResidue
BG2447
BA2448
BC2498
BC2499
BHOH3486
BHOH3487
BHOH3488

site_idJC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2987
ChainResidue
BG570
BA2448
BC2499
BHOH3489
BHOH3490
BHOH3491

site_idJC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2988
ChainResidue
BA1780
BU1782
BA1783
BHOH3492
BHOH3493
BHOH3494

site_idJC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2989
ChainResidue
BA730
BC731
BA761
BHOH3495
BHOH3496
BHOH3497

site_idJC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2990
ChainResidue
BC740
BA1783
BA1784
BHOH3498
BHOH3499
BHOH3500

site_idJC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2991
ChainResidue
BU826
BC2427
BG2428
BG2429
BHOH3501
BHOH3502

site_idJC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2992
ChainResidue
BC31
BG1239
BHOH3503
BHOH3504
BHOH3505
BHOH3506
BHOH3507

site_idJC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 2993
ChainResidue
BG2581
BG2582
BG2583
BU2584
BHOH3508
BHOH3509
BHOH3510

site_idJC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2994
ChainResidue
BU1023
BG1024
BG1025
BG1026
BHOH3511
BHOH3512

site_idKC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2995
ChainResidue
BC2573
BG2574
BC2575
BHOH3513
BHOH3514
BHOH3515

site_idKC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2996
ChainResidue
BA1342
BU1602
BHOH3516
BHOH3517
BHOH3518
BHOH3519

site_idKC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2997
ChainResidue
BHOH3520
BHOH3521
BHOH3522
BHOH3523
BHOH3524
BHOH3525

site_idKC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2998
ChainResidue
BA1669
BC1670
BU1671
BG2550
BHOH3526
BHOH3527

site_idKC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2999
ChainResidue
BG862
BHOH3528
BHOH3529
BHOH3530
BHOH3531
BHOH3532

site_idKC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3000
ChainResidue
BA1938
BHOH3533
BHOH3534
BHOH3535
BHOH3536
BHOH3537

site_idKC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3001
ChainResidue
BHOH3538
BHOH3539
BHOH3540
BHOH3541
BHOH3542
BHOH3543

site_idKC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3002
ChainResidue
BC192
BU2243
BHOH3544
BHOH3545
BHOH3546
BHOH3547

site_idKC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3003
ChainResidue
BG1828
BHOH3548
BHOH3549
BHOH3550
BHOH3551
BHOH3552

site_idLC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3004
ChainResidue
BHOH3553
BHOH3554
BHOH3555
BHOH3556
BHOH3557
BHOH3558

site_idLC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3005
ChainResidue
BA1265
BU2615
BHOH3559
BHOH3560
BHOH3561
BHOH3562

site_idLC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3006
ChainResidue
BA1378
BU1379
BG1380
BHOH3563
BHOH3564
BHOH3565

site_idLC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3007
ChainResidue
BC787
BU790
BHOH3566
BHOH3567
BHOH3568
BHOH3569

site_idLC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3008
ChainResidue
BA195
BA197
BC198
BHOH3570
BHOH3571
BHOH3572

site_idLC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3009
ChainResidue
BC1314
BC1315
BG1332
BHOH3573
BHOH3574
BHOH3575

site_idLC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3010
ChainResidue
BA1676
BHOH3576
BHOH3577
BHOH3578
BHOH3579
BHOH3580

site_idLC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3011
ChainResidue
BC510
BU511
BG512
BHOH3581
BHOH3582
BHOH3583

site_idLC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3012
ChainResidue
BHOH3584
BHOH3585
BHOH3586
BHOH3587
BHOH3588
BHOH3589

site_idMC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3013
ChainResidue
BA1189
BG1190
BHOH3590
BHOH3591
BHOH3592
BHOH3593

site_idMC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 3014
ChainResidue
BA1009
BA1010
BHOH3594
BHOH3595
BHOH3596
BHOH3597

Functional Information from PROSITE/UniProt
site_idPS00430
Number of Residues66
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK
ChainResidueDetails
TMET1-LYS66

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV
ChainResidueDetails
XGLN39-VAL53

site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. DVcskcHPFFTgkqrdvatg....GR
ChainResidueDetails
ZASP35-ARG56

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK
ChainResidueDetails
NILE34-LYS56

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR
ChainResidueDetails
DPHE101-ARG124

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR
ChainResidueDetails
PVAL85-ARG100

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV
ChainResidueDetails
GPRO153-VAL161

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD
ChainResidueDetails
CPRO217-ASP228

site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP
ChainResidueDetails
MLYS58-PRO69

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW
ChainResidueDetails
MARG81-TRP92

site_idPS00651
Number of Residues28
DetailsRIBOSOMAL_L9 Ribosomal protein L9 signature. GslGdqvnVkaGYarNFLvpqgkAvpaT
ChainResidueDetails
HGLY13-THR40

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH
ChainResidueDetails
3LYS4-HIS30

site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT
ChainResidueDetails
RVAL72-THR94

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV
ChainResidueDetails
UASP7-VAL24

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD
ChainResidueDetails
1TYR20-ASP39

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG
ChainResidueDetails
LLYS109-GLY139

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVTLKegqnldfV
ChainResidueDetails
TLYS81-VAL96

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV
ChainResidueDetails
SLYS83-VAL107

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR
ChainResidueDetails
2LYS2-ARG21

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG
ChainResidueDetails
WGLY33-GLY47

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV
ChainResidueDetails
YTHR22-VAL54

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS
ChainResidueDetails
FLEU56-SER72

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR
ChainResidueDetails
QLYS53-ARG69

site_idPS00359
Number of Residues16
DetailsRIBOSOMAL_L11 Ribosomal protein L11 signature. RsIeGTarSMGlVVeD
ChainResidueDetails
IARG126-ASP141

site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG
ChainResidueDetails
JVAL105-GLY127

site_idPS00828
Number of Residues27
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ
ChainResidueDetails
4CYS11-GLN37

site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL
ChainResidueDetails
KALA60-LEU86

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
ZCYS16
HLYS83
HLYS112

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
ZLYS8
ILYS39

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122
ChainResidueDetails
ILYS71
ILYS80

219140

PDB entries from 2024-05-01

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