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4RJ0

The crystal structure of Y333N mutant pyridoxal-dependent decarboxylase from Sphaerobacter thermophilus dsm 20745

Functional Information from GO Data
ChainGOidnamespacecontents
A0004782molecular_functionsulfinoalanine decarboxylase activity
A0005737cellular_componentcytoplasm
A0016829molecular_functionlyase activity
A0016830molecular_functioncarbon-carbon lyase activity
A0016831molecular_functioncarboxy-lyase activity
A0019752biological_processcarboxylic acid metabolic process
A0030170molecular_functionpyridoxal phosphate binding
B0004782molecular_functionsulfinoalanine decarboxylase activity
B0005737cellular_componentcytoplasm
B0016829molecular_functionlyase activity
B0016830molecular_functioncarbon-carbon lyase activity
B0016831molecular_functioncarboxy-lyase activity
B0019752biological_processcarboxylic acid metabolic process
B0030170molecular_functionpyridoxal phosphate binding
C0004782molecular_functionsulfinoalanine decarboxylase activity
C0005737cellular_componentcytoplasm
C0016829molecular_functionlyase activity
C0016830molecular_functioncarbon-carbon lyase activity
C0016831molecular_functioncarboxy-lyase activity
C0019752biological_processcarboxylic acid metabolic process
C0030170molecular_functionpyridoxal phosphate binding
D0004782molecular_functionsulfinoalanine decarboxylase activity
D0005737cellular_componentcytoplasm
D0016829molecular_functionlyase activity
D0016830molecular_functioncarbon-carbon lyase activity
D0016831molecular_functioncarboxy-lyase activity
D0019752biological_processcarboxylic acid metabolic process
D0030170molecular_functionpyridoxal phosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 501
ChainResidue
ALEU6
APRO7
AALA8
AALA10
APHE11
BTYR458

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 502
ChainResidue
AGLU293
ALEU136
APHE137
AARG286

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 C 501
ChainResidue
CLEU136
CPHE137
CARG286
CGLU293

site_idAC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE PMP D 2001
ChainResidue
CTHR351
DMET91
DGLY150
DGLY151
DSER152
DHIS190
DGLY245
DTHR247
DASP272
DALA274
DASN301
DGLN303
DHOH2153
DHOH2169
DHOH2183

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL D 2002
ChainResidue
DPHE137
DARG286
DALA290

220113

PDB entries from 2024-05-22

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