4RIT
The yellow crystal structure of pyridoxal-dependent decarboxylase from sphaerobacter thermophilus dsm 20745
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004782 | molecular_function | sulfinoalanine decarboxylase activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0016829 | molecular_function | lyase activity |
| A | 0016830 | molecular_function | carbon-carbon lyase activity |
| A | 0016831 | molecular_function | carboxy-lyase activity |
| A | 0019752 | biological_process | carboxylic acid metabolic process |
| A | 0030170 | molecular_function | pyridoxal phosphate binding |
| B | 0004782 | molecular_function | sulfinoalanine decarboxylase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0016829 | molecular_function | lyase activity |
| B | 0016830 | molecular_function | carbon-carbon lyase activity |
| B | 0016831 | molecular_function | carboxy-lyase activity |
| B | 0019752 | biological_process | carboxylic acid metabolic process |
| B | 0030170 | molecular_function | pyridoxal phosphate binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CL B 501 |
| Chain | Residue |
| B | ARG396 |
| B | LEU397 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL B 502 |
| Chain | Residue |
| A | HIS353 |
| A | HOH643 |
| A | HOH686 |
| B | HOH616 |
| B | HOH661 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL B 503 |
| Chain | Residue |
| B | PRO457 |
| B | TYR458 |
| B | HOH729 |
| B | HOH750 |
| A | LEU6 |
| A | HOH791 |
| site_id | AC4 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE GOL B 504 |
| Chain | Residue |
| B | LEU374 |
| B | ASP377 |
| B | GLY378 |
| B | LEU381 |
| B | LEU454 |
| B | LEU455 |
| B | ASN456 |
| B | PRO457 |
| B | HOH628 |
| B | HOH750 |
| B | HOH787 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL B 505 |
| Chain | Residue |
| A | ALA71 |
| A | MSE75 |
| B | TRP360 |
| B | HOH719 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL B 506 |
| Chain | Residue |
| B | ARG409 |
| B | ALA417 |
| B | TRP420 |
| B | HOH708 |
| B | HOH886 |
| site_id | AC7 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL B 507 |
| Chain | Residue |
| A | THR64 |
| B | ARG384 |
| B | GLU387 |
| B | GLY388 |
| B | GLN391 |
| B | ARG392 |
| B | ASP465 |
| B | PHE468 |
| B | HOH868 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE TRS B 508 |
| Chain | Residue |
| B | LEU136 |
| B | PHE137 |
| B | ARG286 |
| B | GLU293 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE TRS B 509 |
| Chain | Residue |
| B | GLY266 |
| B | LEU267 |
| B | TRP268 |
| B | ASP296 |
| B | HOH871 |
| site_id | BC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CL A 501 |
| Chain | Residue |
| A | LEU397 |
| site_id | BC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 502 |
| Chain | Residue |
| A | THR127 |
| A | GLY144 |
| A | GLY145 |
| A | ILE346 |
| A | HOH628 |
| A | HOH682 |
| A | HOH796 |
| A | HOH861 |
| site_id | BC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL A 503 |
| Chain | Residue |
| A | ARG124 |
| A | ARG131 |
| A | PHE340 |
| site_id | BC4 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE GOL A 504 |
| Chain | Residue |
| A | TYR307 |
| A | LEU374 |
| A | ASP377 |
| A | GLY378 |
| A | LEU381 |
| A | LEU454 |
| A | LEU455 |
| A | ASN456 |
| A | PRO457 |
| A | HOH820 |
| A | HOH832 |
| site_id | BC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 505 |
| Chain | Residue |
| A | ARG384 |
| A | GLU387 |
| A | ASP465 |
| A | PHE468 |
| A | HOH864 |
| A | HOH865 |
| site_id | BC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL A 506 |
| Chain | Residue |
| A | GLU117 |
| A | HOH826 |
| B | GLN428 |
| B | SER440 |
| B | LEU441 |
| site_id | BC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL A 507 |
| Chain | Residue |
| A | GLY266 |
| A | LEU267 |
| A | ASP296 |
| A | HOH778 |
| A | HOH856 |
| site_id | BC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE TRS A 508 |
| Chain | Residue |
| A | LEU136 |
| A | PHE137 |
| A | ARG286 |
| A | LEU289 |
| A | ALA290 |
| A | GLU293 |
