4PRU
Crystal structure of dimethyllysine hen egg-white lysozyme in complex with sclx4 at 2.2 A resolution
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003796 | molecular_function | lysozyme activity |
A | 0005515 | molecular_function | protein binding |
A | 0005576 | cellular_component | extracellular region |
A | 0005615 | cellular_component | extracellular space |
A | 0005737 | cellular_component | cytoplasm |
A | 0005783 | cellular_component | endoplasmic reticulum |
A | 0016231 | molecular_function | beta-N-acetylglucosaminidase activity |
A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
A | 0016998 | biological_process | cell wall macromolecule catabolic process |
A | 0031640 | biological_process | killing of cells of another organism |
A | 0042742 | biological_process | defense response to bacterium |
A | 0042802 | molecular_function | identical protein binding |
A | 0050829 | biological_process | defense response to Gram-negative bacterium |
A | 0050830 | biological_process | defense response to Gram-positive bacterium |
A | 0051672 | biological_process | obsolete catabolism by organism of cell wall peptidoglycan in other organism |
B | 0003796 | molecular_function | lysozyme activity |
B | 0005515 | molecular_function | protein binding |
B | 0005576 | cellular_component | extracellular region |
B | 0005615 | cellular_component | extracellular space |
B | 0005737 | cellular_component | cytoplasm |
B | 0005783 | cellular_component | endoplasmic reticulum |
B | 0016231 | molecular_function | beta-N-acetylglucosaminidase activity |
B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
B | 0016998 | biological_process | cell wall macromolecule catabolic process |
B | 0031640 | biological_process | killing of cells of another organism |
B | 0042742 | biological_process | defense response to bacterium |
B | 0042802 | molecular_function | identical protein binding |
B | 0050829 | biological_process | defense response to Gram-negative bacterium |
B | 0050830 | biological_process | defense response to Gram-positive bacterium |
B | 0051672 | biological_process | obsolete catabolism by organism of cell wall peptidoglycan in other organism |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE T3Y A 201 |
Chain | Residue |
A | TYR23 |
A | HOH347 |
B | ARG5 |
B | MLY33 |
B | PHE38 |
B | PRO70 |
B | GLY71 |
B | TRP123 |
A | ASN106 |
A | TRP111 |
A | ARG112 |
A | MLY116 |
A | GLY117 |
A | GOL203 |
A | HOH310 |
A | HOH327 |
site_id | AC2 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE T3Y A 202 |
Chain | Residue |
A | DM01 |
A | PHE3 |
A | GLU7 |
A | ALA10 |
A | ALA11 |
A | ARG14 |
A | HIS15 |
A | ARG128 |
A | HOH306 |
A | HOH340 |
A | HOH346 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL A 203 |
Chain | Residue |
A | ASN27 |
A | CYS115 |
A | GLY117 |
A | THR118 |
A | VAL120 |
A | T3Y201 |
B | ARG114 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 204 |
Chain | Residue |
A | PHE34 |
A | ARG114 |
A | THR118 |
A | ASP119 |
A | TRP123 |
B | T3Y201 |
site_id | AC5 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE T3Y B 201 |
Chain | Residue |
A | ARG5 |
A | MLY33 |
A | GLY71 |
A | SER72 |
A | ARG73 |
A | TRP123 |
A | GOL204 |
A | HOH312 |
B | ASN106 |
B | TRP111 |
B | ARG112 |
B | MLY116 |
B | GLY117 |
B | HOH303 |
B | HOH304 |
B | HOH321 |
B | HOH327 |
B | HOH333 |
B | HOH337 |
site_id | AC6 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE T3Y B 202 |
Chain | Residue |
B | DM01 |
B | PHE3 |
B | GLU7 |
B | ALA10 |
B | ALA11 |
B | ARG14 |
B | HIS15 |
B | HOH311 |
B | HOH316 |
B | HOH346 |
B | HOH347 |
Functional Information from PROSITE/UniProt
site_id | PS00128 |
Number of Residues | 19 |
Details | GLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC |
Chain | Residue | Details |
A | CYS76-CYS94 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: |
Chain | Residue | Details |
A | GLU35 | |
A | ASP52 | |
B | GLU35 | |
B | ASP52 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: |
Chain | Residue | Details |
A | ASP101 | |
B | ASP101 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 6 |
Details | M-CSA 203 |
Chain | Residue | Details |
A | GLU35 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
A | ASN46 | |
A | ASP48 | |
A | SER50 | |
A | ASP52 | covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction |
A | ASN59 |
site_id | MCSA2 |
Number of Residues | 6 |
Details | M-CSA 203 |
Chain | Residue | Details |
B | GLU35 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
B | ASN46 | |
B | ASP48 | |
B | SER50 | |
B | ASP52 | covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction |
B | ASN59 |