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4NAI

Arabidopsis thaliana IspD apo

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0008299biological_processisoprenoid biosynthetic process
A0050518molecular_function2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
A0070567molecular_functioncytidylyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CD A 401
ChainResidue
AGLU167
AGLU167
AK411
AK411
AHOH518
AHOH518

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD A 402
ChainResidue
AHOH507
AGLU121
AGLU191
AHIS271

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE K A 403
ChainResidue
AASP289
AARG296
AGLU300
AHOH595
AHOH624

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE K A 404
ChainResidue
ASER117
AMET119
AVAL122
AASP145
AVAL146
AHOH540
AHOH567

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE K A 405
ChainResidue
AASP189
ALEU205
AGLN235
AGLY278
ASER279
AASN282
AK406

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE K A 406
ChainResidue
AVAL185
AASN186
AASP189
AASN282
AK405
AHOH501

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE K A 407
ChainResidue
AARG182
APRO183
ALEU184
AVAL185
AASN282
AILE283

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE K A 408
ChainResidue
AILE108
AALA109
ASER112
ASER180
APRO183

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K A 409
ChainResidue
ASER112
ATHR115
APRO183
AVAL185

site_idBC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE K A 410
ChainResidue
AALA199
AALA199
AALA199
AHOH538
AHOH538
AHOH538
AHOH575
AHOH575
AHOH575

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE K A 411
ChainResidue
AGLN166
AGLU167
AGLU167
ACD401
ACD401
AHOH518
AHOH520

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE K A 412
ChainResidue
AGLU156
AGLU258

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K A 413
ChainResidue
AGLU191
AHOH554
AHOH593

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K A 414
ChainResidue
ASER163
AGLU167
AHOH509
AHOH553

site_idBC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K A 415
ChainResidue
AARG149
AILE168
AHOH588

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE K A 416
ChainResidue
ALYS123
AASP147
AHOH541
AHOH550
AHOH568
AHOH631

Functional Information from PROSITE/UniProt
site_idPS01295
Number of Residues8
DetailsISPD 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. VCIHDSAR
ChainResidueDetails
AVAL175-ARG182

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsSITE: Transition state stabilizer => ECO:0000250
ChainResidueDetails
AARG91
ALYS98

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Positions MEP for the nucleophilic attack => ECO:0000250
ChainResidueDetails
AARG228
ALYS284

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PDB entries from 2024-05-01

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