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4LMH

Crystal structure of the outer membrane decaheme cytochrome OmcA

Functional Information from GO Data
ChainGOidnamespacecontents
A0046872molecular_functionmetal ion binding
A0071281biological_processcellular response to iron ion
B0046872molecular_functionmetal ion binding
B0071281biological_processcellular response to iron ion
C0046872molecular_functionmetal ion binding
C0071281biological_processcellular response to iron ion
D0046872molecular_functionmetal ion binding
D0071281biological_processcellular response to iron ion
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC A 801
ChainResidue
AALA227
AGLY624
AVAL625
AGLN626
ASER627
ATHR629
AHOH976
AHOH1085
ACYS228
ACYS231
AHIS232
ALEU237
AHIS277
ATYR308
ATYR313
AGLN315

site_idAC2
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC A 802
ChainResidue
AGLN142
AVAL145
ALEU239
AHIS240
AARG244
AASN249
ACYS250
ACYS253
AHIS254
AASP260
AILE267
AMET272
AILE299
AGLY300
ATYR308
ACA811
AHOH1085
AHOH1140
AHOH1295

site_idAC3
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEC A 803
ChainResidue
AARG220
ATHR270
AILE273
AHIS274
AHIS277
ATYR313
ACYS321
ACYS324
AHIS325
ALEU337
APHE338
ASER343
AHIS384
AHEC804
AHOH910
AHOH915
AHOH952
AHOH961
AHOH969
AHOH1029
AHOH1112

site_idAC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC A 804
ChainResidue
AHIS274
ALYS278
AALA318
AALA346
ACYS347
ACYS350
AHIS351
AHIS368
AALA380
AARG383
AHIS384
AVAL387
AHEC803
AHEC805
AHOH922
AHOH1077
AHOH1174
AHOH1270

site_idAC5
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC A 805
ChainResidue
AHIS351
AGLU353
APRO355
AHIS359
ASER361
ATHR362
AASP363
ACYS364
ACYS367
AHIS368
ATYR374
ATHR377
AARG383
ATYR517
AHEC804
AHOH970
AHOH977
AHOH1007
BDMS901

site_idAC6
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEC A 806
ChainResidue
AHIS570
AILE574
APHE608
ASER615
AGLY617
AHIS618
AVAL630
ATHR637
AHEC807
ADMS814
AHOH1074
AHIS312
APRO314
ALYS316
ALYS565
ACYS566
ACYS569

site_idAC7
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEC A 807
ChainResidue
ATYR442
ATYR460
AVAL575
AHIS576
ATYR577
AASP578
ACYS583
ACYS586
AHIS587
ALYS591
ATHR606
ALYS611
AHEC806
AHOH1074
AHOH1169

site_idAC8
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEC A 808
ChainResidue
AARG557
AARG558
AILE560
AILE561
AGLN584
APHE608
AALA609
AALA612
AHIS613
AHIS618
ALYS632
AASP634
ACYS635
ACYS638
AHIS639
AILE650
AARG654
AARG658
AHIS733
AHOH1091
AHOH1275

site_idAC9
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEC A 809
ChainResidue
AHIS613
ALYS632
AALA680
ACYS681
ACYS684
AHIS685
ATYR688
AHIS724
ALEU729
AALA732
AHIS733
AHEC810
AHOH1124

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE HEC A 810
ChainResidue
AHIS696
AILE697
AASN700
ASER719
ACYS720
ACYS723
AHIS724
AHEC809

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 811
ChainResidue
AASP260
AGLU262
AILE299
AHEC802
AHOH1294
AHOH1295

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 812
ChainResidue
AHOH1232
AHOH1233
AHOH1234
AHOH1296
AHOH1297

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DMS A 813
ChainResidue
AILE404
ATRP545
AGLY547
ATHR548
ATHR550
AHOH1253

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS A 814
ChainResidue
AHIS312
AGLU616
AGLY617
AGLY624
AHEC806

site_idBC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE DMS A 815
ChainResidue
AGLN233
AASP634
AASN735

site_idBC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DMS A 816
ChainResidue
ATYR374
AGLY375
ATYR517
AHOH1214
BHIS358
BHIS359
BHEC906

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DMS B 901
ChainResidue
AHIS358
AHIS359
AHEC805
BGLY375
BTYR517
BHOH1151

site_idBC9
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC B 902
ChainResidue
BALA227
BCYS228
BCYS231
BHIS232
BLEU237
BHIS277
BTYR308
BTYR313
BPRO314
BGLN315
BCYS324
BGLY624
BVAL625
BGLN626
BSER627
BTHR629
BHOH1028
BHOH1344
BHOH1348

site_idCC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC B 903
ChainResidue
BGLN142
BLEU239
BHIS240
BARG244
BASN249
BCYS250
BCYS253
BHIS254
BASP260
BILE267
BMET272
BILE298
BILE299
BGLY300
BILE306
BTYR308
BCA912
BHOH1138
BHOH1142
BHOH1420

site_idCC2
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC B 904
ChainResidue
BARG220
BPHE269
BTHR270
BILE273
BHIS274
BHIS277
BTYR313
BCYS324
BHIS325
BLEU337
BPHE338
BSER343
BHIS384
BHEC905
BHOH1020
BHOH1025
BHOH1042
BHOH1255
BHOH1257
BHOH1326

site_idCC3
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC B 905
ChainResidue
BHIS274
BLYS278
BALA346
BCYS347
BCYS350
BHIS351
BHIS368
BALA380
BARG383
BHIS384
BVAL387
BHEC904
BHEC906
BHOH1051
BHOH1287
BHOH1381

site_idCC4
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC B 906
ChainResidue
ADMS816
BCYS347
BHIS351
BGLU353
BPRO355
BHIS359
BSER361
BTHR362
BASP363
BCYS364
BCYS367
BHIS368
BTHR377
BARG383
BHEC905
BHOH1068
BHOH1105
BHOH1137
BHOH1381

site_idCC5
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEC B 907
ChainResidue
BHIS312
BPRO314
BLYS316
BLYS565
BCYS566
BCYS569
BHIS570
BILE574
BPHE608
BSER615
BGLY617
BHIS618
BVAL630
BTHR637
BCYS638
BHEC908
BDMS915

site_idCC6
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEC B 908
ChainResidue
BTYR442
BTYR460
BVAL575
BHIS576
BTYR577
BCYS583
BCYS586
BHIS587
BLYS591
BLYS594
BTHR606
BLYS611
BHEC907
BHOH1099

site_idCC7
Number of Residues23
DetailsBINDING SITE FOR RESIDUE HEC B 909
ChainResidue
BARG557
BARG558
BILE561
BGLN584
BPHE608
BALA612
BHIS613
BHIS618
BLYS632
BASP634
BCYS635
BCYS638
BHIS639
BILE650
BLEU652
BARG654
BARG658
BALA680
BHIS733
BHEC910
BHOH1014
BHOH1054
BHOH1147

site_idCC8
Number of Residues12
DetailsBINDING SITE FOR RESIDUE HEC B 910
ChainResidue
BHIS613
BLYS632
BLEU652
BALA680
BCYS681
BCYS684
BHIS685
BHIS724
BLEU729
BHIS733
BHEC909
BHEC911

site_idCC9
Number of Residues11
DetailsBINDING SITE FOR RESIDUE HEC B 911
ChainResidue
BALA678
BHIS696
BILE697
BASN700
BSER719
BCYS720
BCYS723
BHIS724
BHEC910
BHOH1356
CALA329

site_idDC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 912
ChainResidue
BASP260
BGLU262
BILE299
BHEC903
BHOH1419
BHOH1420

site_idDC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA B 913
ChainResidue
BHOH1343
BHOH1344
BHOH1345
BHOH1398

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS B 914
ChainResidue
BILE404
BTRP545
BGLY547
BTHR548

site_idDC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS B 915
ChainResidue
BHIS312
BGLU616
BGLY617
BGLY624
BHEC907

site_idDC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS B 916
ChainResidue
BGLN233
BASP634
BALA636
BASN735
BHOH1209

site_idDC6
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC C 801
ChainResidue
CCYS228
CCYS231
CHIS232
CLEU237
CHIS277
CTYR308
CTYR313
CGLN315
CALA323
CLEU620
CGLY624
CVAL625
CGLN626
CSER627
CTHR629
CHOH922
CHOH933
CHOH1213

site_idDC7
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC C 802
ChainResidue
CGLN142
CVAL145
CLEU239
CHIS240
CARG244
CASN249
CCYS250
CCYS253
CHIS254
CASP260
CILE267
CMET272
CILE299
CGLY300
CILE306
CTYR308
CCA811
CHOH1008
CHOH1118
CHOH1278

site_idDC8
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC C 803
ChainResidue
CARG220
CPHE269
CTHR270
CILE273
CHIS274
CHIS277
CTYR313
CCYS321
CCYS324
CHIS325
CLEU337
CPHE338
CHIS384
CHEC804
CHOH915
CHOH940
CHOH960
CHOH963
CHOH972
CHOH1169

site_idDC9
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC C 804
ChainResidue
CHIS274
CLYS278
CALA346
CCYS347
CCYS350
CHIS351
CHIS368
CALA380
CARG383
CHIS384
CVAL387
CHEC803
CHEC805
CHOH1003
CHOH1117
CHOH1264

site_idEC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC C 805
ChainResidue
CHIS351
CGLU353
CPRO355
CHIS359
CSER361
CTHR362
CASP363
CCYS364
CCYS367
CHIS368
CTYR374
CTHR377
CARG383
CTYR517
CHEC804
CDMS813
CHOH983
CHOH1042
DTYR517

site_idEC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEC C 806
ChainResidue
CCYS231
CHIS312
CPRO314
CLYS316
CLYS565
CCYS566
CCYS569
CHIS570
CPHE608
CSER615
CGLY617
CHIS618
CVAL630
CTHR637
CCYS638
CHEC807
CDMS815

site_idEC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEC C 807
ChainResidue
CTYR442
CTYR460
CVAL575
CHIS576
CTYR577
CCYS583
CCYS586
CHIS587
CLYS591
CLYS594
CTHR606
CLYS611
CHEC806

site_idEC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC C 808
ChainResidue
CARG557
CARG558
CILE560
CILE561
CPHE608
CALA612
CHIS613
CHIS618
CLYS632
CTHR633
CCYS635
CCYS638
CHIS639
CLEU652
CARG654
CARG658
CHOH1099
CHOH1104

site_idEC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE HEC C 809
ChainResidue
CHIS613
CLYS632
CLEU652
CALA680
CCYS681
CCYS684
CHIS685
CHIS724
CHIS733
CHEC810

site_idEC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE HEC C 810
ChainResidue
CALA693
CHIS696
CILE697
CASN700
CGLY702
CSER719
CCYS720
CTHR722
CCYS723
CHIS724
CHEC809

site_idEC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 811
ChainResidue
CASP260
CGLU262
CILE299
CHEC802
CHOH1278
CHOH1279

site_idEC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA C 812
ChainResidue
CHOH1213
CHOH1214
CHOH1215
CHOH1216

site_idEC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DMS C 813
ChainResidue
CHIS358
CHIS359
CHEC805
DTYR374
DGLY375
DTYR517

site_idFC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS C 814
ChainResidue
CILE404
CGLY405
CTRP545
CGLY547
CASP549

site_idFC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DMS C 815
ChainResidue
CHIS312
CGLU616
CGLY617
CLEU620
CGLY624
CHEC806
CHOH962

site_idFC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE DMS C 816
ChainResidue
CGLN233
CASP634

site_idFC4
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEC D 801
ChainResidue
DALA227
DCYS228
DCYS231
DHIS232
DLEU237
DHIS277
DTYR308
DTYR313
DGLN315
DALA323
DCYS324
DLEU620
DGLY624
DVAL625
DGLN626
DSER627
DTHR629
DHEC806
DHOH932
DHOH1173
DHOH1351

site_idFC5
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEC D 802
ChainResidue
DGLN142
DLEU239
DHIS240
DARG244
DASN249
DCYS250
DCYS253
DHIS254
DASP260
DILE267
DMET272
DILE299
DGLY300
DTYR308
DCA811
DHOH1238
DHOH1265

site_idFC6
Number of Residues22
DetailsBINDING SITE FOR RESIDUE HEC D 803
ChainResidue
DARG220
DVAL222
DPHE269
DTHR270
DILE273
DHIS274
DHIS277
DTYR313
DCYS321
DCYS324
DHIS325
DLEU337
DPHE338
DHIS384
DHEC804
DHOH910
DHOH921
DHOH981
DHOH986
DHOH1142
DHOH1249
DHOH1444

site_idFC7
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEC D 804
ChainResidue
DHIS274
DLYS278
DALA346
DCYS347
DCYS350
DHIS351
DHIS368
DALA380
DARG383
DHIS384
DVAL387
DHEC803
DHEC805
DHOH974
DHOH994

site_idFC8
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC D 805
ChainResidue
DCYS347
DHIS351
DGLU353
DPRO355
DHIS359
DSER361
DTHR362
DASP363
DCYS364
DCYS367
DHIS368
DTHR377
DARG383
DTYR517
DHEC804
DDMS813
DHOH1067
DHOH1076

site_idFC9
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC D 806
ChainResidue
DHIS312
DPRO314
DLYS316
DLYS565
DCYS566
DCYS569
DHIS570
DILE574
DVAL575
DPHE608
DSER615
DGLY617
DHIS618
DVAL630
DTHR637
DHEC801
DHEC807
DDMS815
DHOH1153

site_idGC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEC D 807
ChainResidue
DTYR442
DTYR460
DVAL575
DHIS576
DTYR577
DCYS583
DCYS586
DHIS587
DLYS591
DTHR606
DLYS611
DHEC806
DHOH1048
DHOH1225

site_idGC2
Number of Residues22
DetailsBINDING SITE FOR RESIDUE HEC D 808
ChainResidue
DARG557
DARG558
DILE560
DILE561
DGLN584
DPHE608
DALA612
DHIS613
DHIS618
DLYS632
DTHR633
DCYS635
DCYS638
DHIS639
DLEU652
DARG654
DARG658
DHIS733
DHEC809
DHOH911
DHOH924
DHOH1358

site_idGC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEC D 809
ChainResidue
DHIS613
DLYS632
DALA680
DCYS681
DCYS684
DHIS685
DHIS724
DLEU729
DHIS733
DHEC808
DHEC810
DHOH1185
DHOH1380

site_idGC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE HEC D 810
ChainResidue
AALA329
DHIS696
DASN700
DSER719
DCYS720
DCYS723
DHIS724
DHEC809
DHOH941
DHOH1105

site_idGC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA D 811
ChainResidue
DASP260
DGLU262
DILE299
DHEC802
DHOH1265

site_idGC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA D 812
ChainResidue
DHOH1230
DHOH1351
DHOH1352
DHOH1451

site_idGC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DMS D 813
ChainResidue
CTYR374
CTYR517
DHIS358
DHIS359
DTYR374
DHEC805

site_idGC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS D 814
ChainResidue
DILE404
DTRP545
DGLY547
DTHR548
DHOH963

site_idGC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS D 815
ChainResidue
DHIS312
DGLU616
DGLY617
DHEC806

site_idHC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE DMS D 816
ChainResidue
DASP634
DASN735

219869

PDB entries from 2024-05-15

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