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4JV1

Ternary complex of gamma-OHPDG adduct modified dna with dna (-1 primer) polymerase iv and incoming dgtp

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0009432biological_processSOS response
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0042276biological_processerror-prone translesion synthesis
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE DGT A 401
ChainResidue
ATYR10
ACA402
ACA403
AHOH501
AHOH503
AHOH504
AHOH558
BDC604
BHN1605
APHE11
ATYR12
AALA44
ATHR45
ATYR48
AARG51
AASP105
ALYS159

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 402
ChainResidue
AASP7
APHE8
AASP105
ADGT401

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 403
ChainResidue
AASP7
AASP105
AGLU106
ADGT401

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CA A 404
ChainResidue
AALA181
AILE186
AHOH506

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE:
ChainResidueDetails
AGLU106

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING:
ChainResidueDetails
AASP7
AASP105

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Substrate discrimination
ChainResidueDetails
ATYR12

218853

PDB entries from 2024-04-24

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