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4JK6

Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Aba)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 301
ChainResidue
AHIS37
AARG37
BTYR5

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 302
ChainResidue
ASER75
AASN76
AARG206
AHOH450
AHOH455

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 303
ChainResidue
ATHR23
ASER115
AARG116
AHOH430
AHOH470
APHE21

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 304
ChainResidue
ALYS62
ALEU88
AGLN170
APRO170
AHIS170
AHOH469

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 305
ChainResidue
ALEU90
AHIS91
ALYS92
ATRP237

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE P6G A 306
ChainResidue
AASN74
ALEU150
ASER202
AHOH436

site_idAC7
Number of Residues33
DetailsBINDING SITE FOR CHAIN B OF BICYCLIC PEPTIDE UK18-D-ABA INHIBITOR OF UPA
ChainResidue
AARG35
AHIS37
ASER37
ATHR39
ATYR40
AVAL41
ACYS42
AHIS57
AILE60
AASP60
ATYR60
AHIS99
ATYR127
ATYR151
AARG166
ATHR178
AASP189
ASER190
AGLN192
AGLY193
ASER195
AGLY216
AGLY218
ACYS220
AGLY226
ASO4301
AHOH444
AHOH466
AHOH475
BHOH201
BHOH202
BHOH203
BHOH205

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. ISATHC
ChainResidueDetails
AILE53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DScqGDSGGPLV
ChainResidueDetails
AASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system
ChainResidueDetails
AHIS57
AASP102
ASER195

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:9151681
ChainResidueDetails
ASER146

site_idSWS_FT_FI3
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine
ChainResidueDetails
AGLN145

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PDB entries from 2024-06-12

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