4E7X
Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0002134 | molecular_function | UTP binding |
A | 0003723 | molecular_function | RNA binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0036450 | biological_process | polyuridylation-dependent decapping of nuclear-transcribed mRNA |
A | 0046872 | molecular_function | metal ion binding |
A | 0050265 | molecular_function | RNA uridylyltransferase activity |
A | 0071076 | biological_process | RNA 3' uridylation |
A | 1990817 | molecular_function | poly(A) RNA polymerase activity |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0002134 | molecular_function | UTP binding |
B | 0003723 | molecular_function | RNA binding |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0016779 | molecular_function | nucleotidyltransferase activity |
B | 0036450 | biological_process | polyuridylation-dependent decapping of nuclear-transcribed mRNA |
B | 0046872 | molecular_function | metal ion binding |
B | 0050265 | molecular_function | RNA uridylyltransferase activity |
B | 0071076 | biological_process | RNA 3' uridylation |
B | 1990817 | molecular_function | poly(A) RNA polymerase activity |
C | 0000287 | molecular_function | magnesium ion binding |
C | 0002134 | molecular_function | UTP binding |
C | 0003723 | molecular_function | RNA binding |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0016779 | molecular_function | nucleotidyltransferase activity |
C | 0036450 | biological_process | polyuridylation-dependent decapping of nuclear-transcribed mRNA |
C | 0046872 | molecular_function | metal ion binding |
C | 0050265 | molecular_function | RNA uridylyltransferase activity |
C | 0071076 | biological_process | RNA 3' uridylation |
C | 1990817 | molecular_function | poly(A) RNA polymerase activity |
D | 0000287 | molecular_function | magnesium ion binding |
D | 0002134 | molecular_function | UTP binding |
D | 0003723 | molecular_function | RNA binding |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0016779 | molecular_function | nucleotidyltransferase activity |
D | 0036450 | biological_process | polyuridylation-dependent decapping of nuclear-transcribed mRNA |
D | 0046872 | molecular_function | metal ion binding |
D | 0050265 | molecular_function | RNA uridylyltransferase activity |
D | 0071076 | biological_process | RNA 3' uridylation |
D | 1990817 | molecular_function | poly(A) RNA polymerase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 501 |
Chain | Residue |
A | TYR279 |
A | PHE283 |
A | ARG351 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT B 501 |
Chain | Residue |
B | TYR279 |
B | PHE283 |
B | PRO285 |
B | ARG351 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT C 501 |
Chain | Residue |
C | ARG351 |
C | TYR279 |
C | PHE283 |
site_id | AC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT D 501 |
Chain | Residue |
D | TYR279 |
D | PHE283 |
D | ARG351 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22608966, ECO:0000269|PubMed:22751018, ECO:0000269|PubMed:22885303, ECO:0000269|PubMed:24322298, ECO:0007744|PDB:4E80, ECO:0007744|PDB:4EP7, ECO:0007744|PDB:4FH5, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4FHW, ECO:0007744|PDB:4FHX, ECO:0007744|PDB:4NKT |
Chain | Residue | Details |
A | SER90 | |
B | SER90 | |
C | SER90 | |
D | SER90 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22608966, ECO:0000269|PubMed:22885303, ECO:0007744|PDB:4EP7, ECO:0007744|PDB:4FH5, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4FHW, ECO:0007744|PDB:4FHX, ECO:0007744|PDB:4FHY |
Chain | Residue | Details |
B | ASP101 | |
C | ASP101 | |
D | ASP101 | |
A | ASP101 |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22608966, ECO:0000269|PubMed:22885303, ECO:0007744|PDB:4EP7, ECO:0007744|PDB:4FH5, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4FHV, ECO:0007744|PDB:4FHW, ECO:0007744|PDB:4FHX, ECO:0007744|PDB:4FHY |
Chain | Residue | Details |
A | ASP103 | |
B | ASP103 | |
C | ASP103 | |
D | ASP103 |
site_id | SWS_FT_FI4 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22885303, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4FHW |
Chain | Residue | Details |
A | ALA168 | |
B | ALA168 | |
C | ALA168 | |
D | ALA168 |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22608966, ECO:0000269|PubMed:22751018, ECO:0000269|PubMed:22885303, ECO:0000269|PubMed:24322298, ECO:0007744|PDB:4E80, ECO:0007744|PDB:4EP7, ECO:0007744|PDB:4FH5, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4FHV, ECO:0007744|PDB:4FHX, ECO:0007744|PDB:4NKT, ECO:0007744|PDB:4NKU |
Chain | Residue | Details |
A | ASN171 | |
B | ASN171 | |
C | ASN171 | |
D | ASN171 |
site_id | SWS_FT_FI6 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22608966, ECO:0000269|PubMed:22885303, ECO:0000269|PubMed:24322298, ECO:0007744|PDB:4EP7, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4NKT, ECO:0007744|PDB:4NKU |
Chain | Residue | Details |
A | THR172 | |
B | THR172 | |
C | THR172 | |
D | THR172 |
site_id | SWS_FT_FI7 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22608966, ECO:0000269|PubMed:22751018, ECO:0000269|PubMed:22885303, ECO:0000269|PubMed:24322298, ECO:0007744|PDB:4E80, ECO:0007744|PDB:4EP7, ECO:0007744|PDB:4FH5, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4FHV, ECO:0007744|PDB:4FHW, ECO:0007744|PDB:4FHX, ECO:0007744|PDB:4NKT |
Chain | Residue | Details |
A | LYS193 | |
A | SER211 | |
B | LYS193 | |
B | SER211 | |
C | LYS193 | |
C | SER211 | |
D | LYS193 | |
D | SER211 |
site_id | SWS_FT_FI8 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22608966, ECO:0000269|PubMed:22751018, ECO:0000269|PubMed:22885303, ECO:0000269|PubMed:24322298, ECO:0007744|PDB:4E80, ECO:0007744|PDB:4EP7, ECO:0007744|PDB:4FH5, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4FHV, ECO:0007744|PDB:4FHW, ECO:0007744|PDB:4NKT |
Chain | Residue | Details |
A | LYS197 | |
B | LYS197 | |
C | LYS197 | |
D | LYS197 |
site_id | SWS_FT_FI9 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22608966, ECO:0000269|PubMed:22751018, ECO:0000269|PubMed:22885303, ECO:0000269|PubMed:24322298, ECO:0007744|PDB:4E80, ECO:0007744|PDB:4EP7, ECO:0007744|PDB:4FH5, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4FHV, ECO:0007744|PDB:4FHW, ECO:0007744|PDB:4NKT, ECO:0007744|PDB:4NKU |
Chain | Residue | Details |
A | TYR212 | |
B | TYR212 | |
C | TYR212 | |
D | TYR212 |
site_id | SWS_FT_FI10 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22608966, ECO:0000269|PubMed:22885303, ECO:0000269|PubMed:24322298, ECO:0007744|PDB:4EP7, ECO:0007744|PDB:4FH5, ECO:0007744|PDB:4FHP, ECO:0007744|PDB:4FHV, ECO:0007744|PDB:4FHW, ECO:0007744|PDB:4NKT, ECO:0007744|PDB:4NKU |
Chain | Residue | Details |
A | HIS336 | |
B | HIS336 | |
C | HIS336 | |
D | HIS336 |
site_id | SWS_FT_FI11 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22885303, ECO:0007744|PDB:4FHX |
Chain | Residue | Details |
A | ARG340 | |
B | ARG340 | |
C | ARG340 | |
D | ARG340 |