3WOO
Crystal structure of the DAP BII hexapeptide complex I
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004175 | molecular_function | endopeptidase activity |
| A | 0004177 | molecular_function | aminopeptidase activity |
| A | 0006508 | biological_process | proteolysis |
| A | 0008239 | molecular_function | dipeptidyl-peptidase activity |
| A | 0042802 | molecular_function | identical protein binding |
| A | 0042803 | molecular_function | protein homodimerization activity |
| A | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| A | 0070009 | molecular_function | serine-type aminopeptidase activity |
| B | 0004175 | molecular_function | endopeptidase activity |
| B | 0004177 | molecular_function | aminopeptidase activity |
| B | 0006508 | biological_process | proteolysis |
| B | 0008239 | molecular_function | dipeptidyl-peptidase activity |
| B | 0042802 | molecular_function | identical protein binding |
| B | 0042803 | molecular_function | protein homodimerization activity |
| B | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| B | 0070009 | molecular_function | serine-type aminopeptidase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE GOL A 801 |
| Chain | Residue |
| A | THR598 |
| B | HOH965 |
| A | PHE600 |
| A | ILE639 |
| A | HOH919 |
| A | HOH1053 |
| A | HOH1125 |
| A | HOH1410 |
| B | ASP593 |
| B | GLY594 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 802 |
| Chain | Residue |
| A | ASP59 |
| A | LYS251 |
| A | HIS252 |
| A | TRP253 |
| A | LYS255 |
| A | HOH1219 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 803 |
| Chain | Residue |
| A | GLY68 |
| A | ARG175 |
| A | HOH952 |
| A | HOH1208 |
| A | HOH1283 |
| A | HOH1357 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 804 |
| Chain | Residue |
| A | TYR89 |
| A | LYS208 |
| A | ASP212 |
| A | ALA322 |
| A | ALA326 |
| A | ASN329 |
| A | HOH1439 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL A 805 |
| Chain | Residue |
| A | CYS87 |
| A | ALA88 |
| A | GLY90 |
| A | ALA91 |
| A | TYR228 |
| A | HOH944 |
| A | HOH1026 |
| A | HOH1032 |
| A | HOH1157 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 806 |
| Chain | Residue |
| A | ARG413 |
| A | LEU535 |
| A | GLU539 |
| A | ARG542 |
| A | HOH1099 |
| A | HOH1195 |
| A | HOH1396 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE GOL A 807 |
| Chain | Residue |
| A | ASN101 |
| A | GLN318 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL A 808 |
| Chain | Residue |
| A | ALA257 |
| A | ASP258 |
| A | ARG699 |
| A | HOH920 |
| A | HOH1311 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN A 809 |
| Chain | Residue |
| A | LYS47 |
| A | GLU635 |
| A | HIS665 |
| A | HOH1436 |
| site_id | BC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN A 810 |
| Chain | Residue |
| A | GLU505 |
| A | LYS508 |
| A | HOH1433 |
| B | GLU438 |
| site_id | BC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL B 801 |
| Chain | Residue |
| A | ASP593 |
| A | GLY594 |
| A | HOH945 |
| B | THR598 |
| B | PHE600 |
| B | ILE639 |
| B | HOH942 |
| B | HOH1131 |
| site_id | BC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL B 802 |
| Chain | Residue |
| B | LEU127 |
| B | ASP128 |
| B | PHE172 |
| B | LEU191 |
| B | LYS251 |
| site_id | BC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL B 803 |
| Chain | Residue |
| B | ASP59 |
| B | LYS251 |
| B | HIS252 |
| B | TRP253 |
| B | LYS255 |
| B | PRO468 |
| site_id | BC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL B 804 |
| Chain | Residue |
| B | GLY68 |
| B | ARG175 |
| B | ASN190 |
| B | HOH955 |
| site_id | BC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN B 805 |
| Chain | Residue |
| B | LYS47 |
| B | GLU635 |
| B | HIS665 |
| B | HOH1295 |
| site_id | BC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN B 806 |
| Chain | Residue |
| A | GLU438 |
| B | GLU505 |
| B | LYS508 |
| B | HOH1294 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 6 |
| Details | ACT_SITE: Charge relay system => ECO:0000305|PubMed:24598890, ECO:0000305|PubMed:24827749 |
| Chain | Residue | Details |
| A | ALA86 | |
| A | ASP224 | |
| A | SER657 | |
| B | ALA86 | |
| B | ASP224 | |
| B | SER657 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:24827749 |
| Chain | Residue | Details |
| A | GLY655 | |
| A | PHE673 | |
| B | ASN215 | |
| B | ASN330 | |
| B | GLY655 | |
| B | PHE673 | |
| A | ASN215 | |
| A | ASN330 |
