Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VQY

Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with BocLys and AMPPNP (form 2)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0005524molecular_functionATP binding
A0043039biological_processtRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues22
DetailsBINDING SITE FOR RESIDUE ANP A 501
ChainResidue
AARG330
ASER399
AGLY421
AGLY423
AARG426
ALBY502
AMG503
AMG504
AHOH602
AHOH640
AHOH656
AGLU332
AHOH670
AHOH685
AHOH697
AHIS338
ALEU339
APHE342
AMET344
AGLU396
ALEU397
ASER398

site_idAC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE LBY A 502
ChainResidue
AMET276
AALA302
ATYR306
AASN346
ASER399
AILE405
ATRP417
AALA420
AGLY421
AANP501

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 503
ChainResidue
AARG330
AANP501
AHOH601
AHOH656
AHOH685
AHOH697

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 504
ChainResidue
AGLU396
ASER399
AANP501
AHOH640

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon