3T8I
Structural analysis of thermostable S. solfataricus purine-specific nucleoside hydrolase
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005829 | cellular_component | cytosol |
A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
A | 0006152 | biological_process | purine nucleoside catabolic process |
A | 0008477 | molecular_function | purine nucleosidase activity |
A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
A | 0016799 | molecular_function | hydrolase activity, hydrolyzing N-glycosyl compounds |
A | 0046872 | molecular_function | metal ion binding |
B | 0005829 | cellular_component | cytosol |
B | 0006139 | biological_process | nucleobase-containing compound metabolic process |
B | 0006152 | biological_process | purine nucleoside catabolic process |
B | 0008477 | molecular_function | purine nucleosidase activity |
B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
B | 0016799 | molecular_function | hydrolase activity, hydrolyzing N-glycosyl compounds |
B | 0046872 | molecular_function | metal ion binding |
C | 0005829 | cellular_component | cytosol |
C | 0006139 | biological_process | nucleobase-containing compound metabolic process |
C | 0006152 | biological_process | purine nucleoside catabolic process |
C | 0008477 | molecular_function | purine nucleosidase activity |
C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
C | 0016799 | molecular_function | hydrolase activity, hydrolyzing N-glycosyl compounds |
C | 0046872 | molecular_function | metal ion binding |
D | 0005829 | cellular_component | cytosol |
D | 0006139 | biological_process | nucleobase-containing compound metabolic process |
D | 0006152 | biological_process | purine nucleoside catabolic process |
D | 0008477 | molecular_function | purine nucleosidase activity |
D | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
D | 0016799 | molecular_function | hydrolase activity, hydrolyzing N-glycosyl compounds |
D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CA A 400 |
Chain | Residue |
A | ASP9 |
A | ASP14 |
A | ILE121 |
A | ASP238 |
A | GOL307 |
A | HOH356 |
A | HOH391 |
site_id | AC2 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL A 307 |
Chain | Residue |
A | ASN155 |
A | GLU161 |
A | PHE162 |
A | ASN163 |
A | ASP238 |
A | HOH356 |
A | HOH391 |
A | CA400 |
A | ILE121 |
A | MET147 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 308 |
Chain | Residue |
A | PHE179 |
A | ASP180 |
A | ILE181 |
A | ASN284 |
A | GLU286 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 309 |
Chain | Residue |
A | TRP275 |
A | HOH357 |
A | HOH375 |
A | HOH411 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 310 |
Chain | Residue |
A | ASN155 |
A | HOH316 |
A | HOH371 |
A | HOH422 |
A | HOH448 |
A | HOH916 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 311 |
Chain | Residue |
A | LEU69 |
A | ASN71 |
A | HOH433 |
B | LYS172 |
B | LEU263 |
C | LYS266 |
site_id | AC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE EDO A 312 |
Chain | Residue |
A | TRP72 |
A | HOH393 |
site_id | AC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CA B 400 |
Chain | Residue |
B | ASP9 |
B | ASP14 |
B | ILE121 |
B | ASP238 |
B | GOL307 |
B | HOH322 |
B | HOH338 |
site_id | AC9 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL B 307 |
Chain | Residue |
B | ILE121 |
B | MET147 |
B | ASN155 |
B | GLU161 |
B | PHE162 |
B | ASN163 |
B | ASP238 |
B | HOH322 |
B | HOH338 |
B | CA400 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL B 308 |
Chain | Residue |
B | LYS282 |
B | HOH333 |
B | HOH380 |
B | HOH405 |
B | HOH652 |
site_id | BC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL B 309 |
Chain | Residue |
B | PHE151 |
B | TRP275 |
B | HOH370 |
B | HOH849 |
C | LYS153 |
site_id | BC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL B 310 |
Chain | Residue |
B | VAL138 |
B | LYS139 |
B | VAL141 |
B | LYS142 |
B | GLY178 |
B | PHE179 |
B | ASP180 |
B | HOH538 |
B | HOH956 |
site_id | BC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL B 311 |
Chain | Residue |
B | ARG2 |
B | HIS246 |
B | ASP247 |
B | ASN248 |
B | HOH909 |
site_id | BC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL B 312 |
Chain | Residue |
B | ASN155 |
B | TRP186 |
B | HOH350 |
B | HOH399 |
B | HOH445 |
B | HOH923 |
B | HOH927 |
site_id | BC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL B 313 |
Chain | Residue |
B | TRP72 |
B | HOH354 |
B | HOH395 |
B | HOH396 |
B | HOH638 |
site_id | BC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE EDO B 314 |
Chain | Residue |
B | ARG198 |
B | GLU201 |
site_id | BC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CA C 400 |
Chain | Residue |
C | GOL307 |
C | HOH334 |
C | HOH360 |
C | ASP9 |
C | ASP14 |
C | ILE121 |
C | ASP238 |
site_id | BC9 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE GOL C 307 |
Chain | Residue |
C | ILE121 |
C | MET147 |
C | ASN155 |
C | GLU161 |
C | PHE162 |
C | ASN163 |
C | PRO237 |
C | ASP238 |
C | GOL308 |
C | HOH334 |
C | HOH360 |
C | CA400 |
site_id | CC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 308 |
Chain | Residue |
C | VAL75 |
C | ASN155 |
C | GOL307 |
C | HOH763 |
C | HOH836 |
site_id | CC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL C 309 |
Chain | Residue |
C | HOH601 |
C | HOH872 |
C | HOH936 |
site_id | CC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PEG C 310 |
Chain | Residue |
C | TRP72 |
C | ARG73 |
C | THR74 |
site_id | CC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO C 311 |
Chain | Residue |
C | PHE179 |
C | ILE181 |
C | LEU256 |
C | ASN284 |
C | ALA285 |
C | GLU286 |
site_id | CC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CA D 400 |
Chain | Residue |
D | ASP9 |
D | ASP14 |
D | ILE121 |
D | ASP238 |
D | GOL307 |
D | HOH332 |
D | HOH347 |
site_id | CC6 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL D 307 |
Chain | Residue |
D | ILE121 |
D | MET147 |
D | ASN155 |
D | GLU161 |
D | ASN163 |
D | ASP238 |
D | HOH332 |
D | HOH347 |
D | CA400 |
site_id | CC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL D 308 |
Chain | Residue |
D | TRP72 |
D | ARG73 |
D | THR74 |
D | HOH367 |
D | HOH725 |
site_id | CC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL D 309 |
Chain | Residue |
D | VAL75 |
D | ASN155 |
D | THR156 |
D | PHE162 |
D | TYR224 |
D | HOH368 |
D | HOH579 |
site_id | CC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PEG D 310 |
Chain | Residue |
C | ARG66 |
C | LEU69 |
D | TYR131 |
D | ILE173 |
D | ASP176 |
D | ALA177 |
Functional Information from PROSITE/UniProt
site_id | PS01247 |
Number of Residues | 11 |
Details | IUNH Inosine-uridine preferring nucleoside hydrolase family signature. DsDTAtDDTIA |
Chain | Residue | Details |
A | ASP7-ALA17 |