Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001882 | molecular_function | nucleoside binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006281 | biological_process | DNA repair |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE 5SI A 1 |
Chain | Residue |
A | HOH153 |
A | PRO816 |
A | MG834 |
A | MG842 |
A | HOH901 |
A | HOH905 |
A | HOH906 |
A | HOH154 |
A | HOH170 |
A | GLN633 |
A | ARG801 |
A | LYS804 |
A | GLU805 |
A | LEU813 |
A | ALA814 |
site_id | AC2 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE 5SI A 833 |
Chain | Residue |
A | HOH169 |
A | HOH191 |
A | ARG573 |
A | ASP610 |
A | TYR611 |
A | GLN613 |
A | ILE614 |
A | GLU615 |
A | HIS639 |
A | ARG659 |
A | LYS663 |
A | THR664 |
A | PHE667 |
A | ASP785 |
A | MG836 |
A | MG837 |
A | HOH893 |
B | HOH49 |
B | DOC112 |
C | DG205 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG A 834 |
Chain | Residue |
A | 5SI1 |
A | HOH153 |
A | HOH154 |
A | HOH170 |
site_id | AC4 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL A 835 |
Chain | Residue |
A | THR544 |
A | TYR545 |
A | PRO579 |
A | ASN580 |
A | ASN583 |
A | HOH871 |
A | HOH882 |
C | HOH95 |
C | DC209 |
C | DC210 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 2 |
Chain | Residue |
A | HOH155 |
A | ARG313 |
A | TRP318 |
A | ASP551 |
A | LEU552 |
site_id | AC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE FMT A 8 |
Chain | Residue |
A | GLU337 |
A | LYS340 |
site_id | AC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE FMT A 9 |
Chain | Residue |
A | HIS443 |
A | THR447 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A 836 |
Chain | Residue |
A | ASP610 |
A | TYR611 |
A | ASP785 |
A | 5SI833 |
A | MG837 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG A 837 |
Chain | Residue |
A | HOH163 |
A | ASP610 |
A | ASP785 |
A | 5SI833 |
A | MG836 |
A | HOH855 |
B | DOC112 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE FMT A 838 |
Chain | Residue |
A | ILE823 |
A | GLY824 |
A | GLU825 |
A | SER829 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE FMT A 839 |
Chain | Residue |
A | PRO792 |
A | LYS793 |
A | GLU794 |
A | ARG795 |
site_id | BC3 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE FMT A 840 |
site_id | BC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE FMT A 841 |
Chain | Residue |
A | LEU311 |
A | GLU400 |
A | ARG405 |
site_id | BC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 842 |
Chain | Residue |
A | 5SI1 |
A | HOH901 |
A | HOH902 |
A | HOH903 |
A | HOH904 |
A | HOH905 |
site_id | BC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE FMT A 843 |
Chain | Residue |
A | ASP488 |
A | LYS511 |
A | HOH852 |
B | DC106 |
C | DT212 |
C | FMT217 |
site_id | BC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE FMT A 844 |
Chain | Residue |
A | GLU708 |
A | ARG715 |
A | HOH908 |
site_id | BC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE FMT A 845 |
Chain | Residue |
A | HOH106 |
A | ASN485 |
B | DG107 |
A | HOH89 |
A | HOH90 |
site_id | BC9 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE FMT A 846 |
site_id | CC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE FMT A 847 |
Chain | Residue |
A | TYR455 |
A | ARG596 |
site_id | CC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG B 1 |
Chain | Residue |
B | HOH2 |
B | HOH3 |
B | HOH4 |
B | HOH5 |
B | HOH6 |
C | HOH222 |
site_id | CC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL C 3 |
Chain | Residue |
C | HOH41 |
C | DG205 |
C | DG206 |
site_id | CC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE FMT C 4 |
Chain | Residue |
A | ARG728 |
C | DG206 |
C | DC207 |
site_id | CC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE FMT C 6 |
Chain | Residue |
C | HOH135 |
C | DC207 |
C | DG208 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE FMT C 1 |
Chain | Residue |
C | HOH35 |
C | DG213 |
C | DG214 |
site_id | CC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE FMT C 217 |
Chain | Residue |
A | HOH90 |
A | HOH121 |
A | ARG487 |
A | FMT843 |
A | HOH852 |
C | HOH8 |
C | DG211 |
C | DT212 |
site_id | CC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 218 |
Chain | Residue |
B | DC104 |
C | HOH36 |
C | DC210 |
C | DG211 |
C | DT212 |
site_id | CC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE FMT C 219 |
Chain | Residue |
A | ARG556 |
B | DC103 |
C | DT215 |
C | DC216 |
Functional Information from PROSITE/UniProt
site_id | PS00447 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL |
Chain | Residue | Details |
A | ARG659-LEU678 | |