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3RRH

Ternary Structure of the large fragment of Taq DNA polymerase bound to an abasic site and a ddTTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0001882molecular_functionnucleoside binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE TTP A 1
ChainResidue
AHOH67
AASP785
AMG833
AHOH854
AHOH875
AHOH876
AHOH888
B2DT112
AHOH85
AHOH171
AGLN613
AHIS639
AARG659
ALYS663
APHE667
ATYR671

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 833
ChainResidue
ATTP1
AHOH875
AHOH876

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 834
ChainResidue
AHOH149
ATHR544
ATYR545
APRO579
AASN580
AASN583
CDC209
CDC210

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PGE A 835
ChainResidue
AARG313

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 836
ChainResidue
AHOH74
AHOH276
AARG425
ATRP428

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACT A 837
ChainResidue
ASER644
AHOH893

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 1
ChainResidue
BHOH20
BHOH43
BHOH176
CHOH144
CHOH290

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PGE B 113
ChainResidue
AHOH90
BHOH43
BHOH63
BDC106
BDG107

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL C 1
ChainResidue
CDG213
CDG214
CDT215
CHOH365

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL C 217
ChainResidue
AALA570
AARG728
CDG206
CDC207
CHOH287

Functional Information from PROSITE/UniProt
site_idPS00447
Number of Residues20
DetailsDNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL
ChainResidueDetails
AARG659-LEU678

220472

PDB entries from 2024-05-29

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