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3QB5

Human C3PO complex in the presence of MnSO4

Functional Information from GO Data
ChainGOidnamespacecontents
A0001673cellular_componentmale germ cell nucleus
A0003677molecular_functionDNA binding
A0003697molecular_functionsingle-stranded DNA binding
A0003723molecular_functionRNA binding
A0003729molecular_functionmRNA binding
A0004519molecular_functionendonuclease activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0005829cellular_componentcytosol
A0006310biological_processDNA recombination
A0016070biological_processRNA metabolic process
A0030422biological_processsiRNA processing
A0035194biological_processregulatory ncRNA-mediated post-transcriptional gene silencing
A0042802molecular_functionidentical protein binding
A0043565molecular_functionsequence-specific DNA binding
A1902555cellular_componentendoribonuclease complex
B0001673cellular_componentmale germ cell nucleus
B0003677molecular_functionDNA binding
B0003697molecular_functionsingle-stranded DNA binding
B0003723molecular_functionRNA binding
B0003729molecular_functionmRNA binding
B0004519molecular_functionendonuclease activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005783cellular_componentendoplasmic reticulum
B0005829cellular_componentcytosol
B0006310biological_processDNA recombination
B0016070biological_processRNA metabolic process
B0030422biological_processsiRNA processing
B0035194biological_processregulatory ncRNA-mediated post-transcriptional gene silencing
B0042802molecular_functionidentical protein binding
B0043565molecular_functionsequence-specific DNA binding
B1902555cellular_componentendoribonuclease complex
C0001673cellular_componentmale germ cell nucleus
C0003677molecular_functionDNA binding
C0003697molecular_functionsingle-stranded DNA binding
C0003723molecular_functionRNA binding
C0003729molecular_functionmRNA binding
C0004519molecular_functionendonuclease activity
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005654cellular_componentnucleoplasm
C0005737cellular_componentcytoplasm
C0005783cellular_componentendoplasmic reticulum
C0005829cellular_componentcytosol
C0006310biological_processDNA recombination
C0016070biological_processRNA metabolic process
C0030422biological_processsiRNA processing
C0035194biological_processregulatory ncRNA-mediated post-transcriptional gene silencing
C0042802molecular_functionidentical protein binding
C0043565molecular_functionsequence-specific DNA binding
C1902555cellular_componentendoribonuclease complex
K0003677molecular_functionDNA binding
K0003697molecular_functionsingle-stranded DNA binding
K0003723molecular_functionRNA binding
K0004521molecular_functionRNA endonuclease activity
K0005634cellular_componentnucleus
K0005654cellular_componentnucleoplasm
K0005737cellular_componentcytoplasm
K0005794cellular_componentGolgi apparatus
K0005829cellular_componentcytosol
K0007283biological_processspermatogenesis
K0030154biological_processcell differentiation
K0030422biological_processsiRNA processing
K0031687molecular_functionA2A adenosine receptor binding
K0035194biological_processregulatory ncRNA-mediated post-transcriptional gene silencing
K0043565molecular_functionsequence-specific DNA binding
K0044877molecular_functionprotein-containing complex binding
K0046872molecular_functionmetal ion binding
K0048471cellular_componentperinuclear region of cytoplasm
K1902555cellular_componentendoribonuclease complex
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE NA A 229
ChainResidue
AASP136

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 C 229
ChainResidue
CLYS187
CASN188
KARG61
KLYS68

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL C 230
ChainResidue
CARG215
KLYS269

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MN K 291
ChainResidue
KSO4294
KGLU129
KGLU197

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 K 292
ChainResidue
CASP196
CLYS199
CTYR200
KMET199
KLYS252

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 K 293
ChainResidue
KARG200

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 K 294
ChainResidue
CASN188
CARG192
KLYS68
KGLU126
KMN291

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING:
ChainResidueDetails
KGLU129
KGLU197
BLYS187
BLYS199
CLYS187
CLYS199

site_idSWS_FT_FI2
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
KLYS279
BSER190
CSER190

220113

PDB entries from 2024-05-22

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