3PYB
Crystal structure of ent-copalyl diphosphate synthase from Arabidopsis thaliana in complex with 13-aza-13,14-dihydrocopalyl diphosphate
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0003824 | molecular_function | catalytic activity |
A | 0008299 | biological_process | isoprenoid biosynthetic process |
A | 0009507 | cellular_component | chloroplast |
A | 0009686 | biological_process | gibberellin biosynthetic process |
A | 0009740 | biological_process | gibberellic acid mediated signaling pathway |
A | 0009905 | molecular_function | ent-copalyl diphosphate synthase activity |
A | 0010333 | molecular_function | terpene synthase activity |
A | 0016102 | biological_process | diterpenoid biosynthetic process |
A | 0016829 | molecular_function | lyase activity |
A | 0016853 | molecular_function | isomerase activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0003824 | molecular_function | catalytic activity |
B | 0008299 | biological_process | isoprenoid biosynthetic process |
B | 0009507 | cellular_component | chloroplast |
B | 0009686 | biological_process | gibberellin biosynthetic process |
B | 0009740 | biological_process | gibberellic acid mediated signaling pathway |
B | 0009905 | molecular_function | ent-copalyl diphosphate synthase activity |
B | 0010333 | molecular_function | terpene synthase activity |
B | 0016102 | biological_process | diterpenoid biosynthetic process |
B | 0016829 | molecular_function | lyase activity |
B | 0016853 | molecular_function | isomerase activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0000287 | molecular_function | magnesium ion binding |
C | 0003824 | molecular_function | catalytic activity |
C | 0008299 | biological_process | isoprenoid biosynthetic process |
C | 0009507 | cellular_component | chloroplast |
C | 0009686 | biological_process | gibberellin biosynthetic process |
C | 0009740 | biological_process | gibberellic acid mediated signaling pathway |
C | 0009905 | molecular_function | ent-copalyl diphosphate synthase activity |
C | 0010333 | molecular_function | terpene synthase activity |
C | 0016102 | biological_process | diterpenoid biosynthetic process |
C | 0016829 | molecular_function | lyase activity |
C | 0016853 | molecular_function | isomerase activity |
C | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE A3C A 901 |
Chain | Residue |
A | ASP149 |
A | HIS182 |
A | LYS186 |
A | GLU193 |
A | GLN791 |
A | SER795 |
A | PHE799 |
A | HOH846 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE 1PE A 911 |
Chain | Residue |
A | LYS444 |
A | TYR448 |
A | TYR483 |
A | TYR427 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE 1PE A 921 |
Chain | Residue |
A | SER657 |
A | PHE658 |
A | ASP667 |
A | ASN669 |
C | SER137 |
C | LYS140 |
site_id | AC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE 1PE A 931 |
Chain | Residue |
A | ASP380 |
A | TYR511 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE 1PE A 811 |
Chain | Residue |
A | LYS140 |
B | ASN654 |
B | SER657 |
B | PHE658 |
B | PHE661 |
B | ASP667 |
B | ASN669 |
site_id | AC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE 1PE B 911 |
Chain | Residue |
B | HOH38 |
B | TYR427 |
B | LYS441 |
B | LYS444 |
B | GLU445 |
B | TYR483 |
B | GLU749 |
site_id | AC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE 1PE B 931 |
Chain | Residue |
B | ILE208 |
B | ASP377 |
B | TYR511 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE 1PE B 921 |
Chain | Residue |
B | PRO136 |
B | LYS140 |
C | ASN654 |
C | SER657 |
C | PHE658 |
C | ASP667 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE 1PE C 911 |
Chain | Residue |
C | TYR427 |
C | LYS444 |
C | TYR448 |
C | TYR483 |
C | GLU749 |
C | HOH825 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE 1PE C 931 |
Chain | Residue |
C | ILE208 |
C | ASP377 |
C | ASP379 |
C | ASP380 |
C | TYR511 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000269|PubMed:21602811, ECO:0007744|PDB:3PYA |
Chain | Residue | Details |
A | LYS245 | |
A | LYS463 | |
B | LYS245 | |
B | LYS463 | |
C | LYS245 | |
C | LYS463 |
site_id | SWS_FT_FI2 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000250|UniProtKB:C7BKP9 |
Chain | Residue | Details |
A | ASP377 | |
A | ASP379 | |
B | ASP377 | |
B | ASP379 | |
C | ASP377 | |
C | ASP379 |