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3OYA

Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and raltegravir at 2.65 resolution

Replaces:  3L2T
Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0015074biological_processDNA integration
B0003676molecular_functionnucleic acid binding
B0015074biological_processDNA integration
Functional Information from PDB Data
site_id1
Number of Residues
Details
ChainResidue

site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 393
ChainResidue
AHIS62
AHIS66
ACYS96
ACYS99

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 394
ChainResidue
AHIS338
ALYS339
AHIS357
AHOH429
AHOH463

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 801
ChainResidue
ASER162
ATHR163

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 802
ChainResidue
APRO135
ASER136
AGLN137
ALYS241

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 805
ChainResidue
AGLN60
ATYR80
APRO277
APHE278

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE NH4 A 395
ChainResidue
AASP116

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 396
ChainResidue
AASP128
AASP185
ARLT398
AHOH401
AHOH534

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 397
ChainResidue
AASP128
AGLU221
AASN224
ARLT398
AHOH400

site_idAC9
Number of Residues14
DetailsBINDING SITE FOR RESIDUE RLT A 398
ChainResidue
AASP128
AASP185
ATYR212
APRO214
AGLN215
AGLU221
AMG396
AMG397
AHOH400
AHOH401
AHOH534
CDG4
DDC16
DDA17

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 393
ChainResidue
BLYS219
BARG222
BSER258
BPRO259
BVAL260

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL B 803
ChainResidue
ALEU292
AGLN296
BGLY271
BASP273

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 394
ChainResidue
BASP128
BASP185
BHOH395
BHOH396
BHOH433
CDA19

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP123
AASP185
BASP123
BASP185

218853

PDB entries from 2024-04-24

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