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3O0Q

Thermotoga maritima Ribonucleotide Reductase, NrdJ, in complex with dTTP, GDP and Adenosine

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
A0005524molecular_functionATP binding
A0009263biological_processdeoxyribonucleotide biosynthetic process
A0031419molecular_functioncobalamin binding
B0000166molecular_functionnucleotide binding
B0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
B0005524molecular_functionATP binding
B0009263biological_processdeoxyribonucleotide biosynthetic process
B0031419molecular_functioncobalamin binding
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE TTP A 1001
ChainResidue
AASP141
APHE190
AHOH646
AHOH706
AHOH707
AHOH718
AHOH779
AHOH786
AMG1002
BLYS158
BVAL200
ASER142
BVAL201
BLYS202
AILE143
AARG171
AVAL177
AALA178
AGLY179
AALA184
ASER185

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 1002
ChainResidue
AHOH705
AHOH706
AHOH707
ATTP1001

site_idAC3
Number of Residues23
DetailsBINDING SITE FOR RESIDUE GDP A 1003
ChainResidue
AASN90
ASER91
AALA133
AGLY161
AARG207
AARG208
AALA210
AASN320
APRO321
ACYS322
AGLU324
AALA489
APRO490
ATHR491
AGLY492
ASER493
AILE494
AHOH730
AHOH766
AHOH793
AHOH802
AHOH891
AHOH970

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE ADN A 1004
ChainResidue
AMET212
AASN242
ALEU243
ASER244
AASP295
AGLY297
ACYS322
ATHR598
ATHR626
AHOH762
AHOH763

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1005
ChainResidue
AVAL607
AVAL607

site_idAC6
Number of Residues19
DetailsBINDING SITE FOR RESIDUE TTP B 1001
ChainResidue
ALYS158
AVAL200
AVAL201
ALYS202
BASP141
BSER142
BILE143
BARG171
BVAL177
BALA178
BGLY179
BALA184
BSER185
BPHE190
BHOH751
BHOH763
BHOH937
BHOH979
BMG1002

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG B 1002
ChainResidue
BHOH703
BHOH704
BTTP1001

site_idAC8
Number of Residues24
DetailsBINDING SITE FOR RESIDUE GDP B 1003
ChainResidue
BILE494
BHOH646
BHOH664
BHOH790
BHOH819
BHOH900
BHOH961
BHOH1038
BASN90
BSER91
BALA133
BGLY161
BARG207
BARG208
BALA210
BASN320
BPRO321
BCYS322
BGLU324
BALA489
BPRO490
BTHR491
BGLY492
BSER493

site_idAC9
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ADN B 1004
ChainResidue
BASN242
BLEU243
BSER244
BASP295
BCYS322
BPRO490
BSER596
BLYS597
BTHR598
BTHR626
BHOH671
BHOH739
BHOH760
BHOH773
BHOH789

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PDB entries from 2024-05-29

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