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3NBF

Q28E mutant of hera helicase N-terminal domain bound to 8-oxo-ADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003724molecular_functionRNA helicase activity
A0005524molecular_functionATP binding
B0003676molecular_functionnucleic acid binding
B0003724molecular_functionRNA helicase activity
B0005524molecular_functionATP binding
C0003676molecular_functionnucleic acid binding
C0003724molecular_functionRNA helicase activity
C0005524molecular_functionATP binding
D0003676molecular_functionnucleic acid binding
D0003724molecular_functionRNA helicase activity
D0005524molecular_functionATP binding
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE 8OD A 500
ChainResidue
APHE3
AGLU91
AHOH212
AHOH272
AHOH282
BTHR108
BGLY109
BLYS112
CARG191
ALEU21
ATHR23
APRO24
AGLU28
ATHR49
AGLY50
ALYS51
ATHR52

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE 8OD A 600
ChainResidue
APRO80
ATHR81
AARG82
AGLU83
AGLY106
ATHR127
AGLY129
AARG130
APHE161
AHOH235
B8OD600

site_idAC3
Number of Residues17
DetailsBINDING SITE FOR RESIDUE 8OD B 500
ChainResidue
ATHR108
BLEU21
BTHR23
BPRO24
BTHR25
BGLU28
BTHR47
BGLY48
BTHR49
BGLY50
BLYS51
BTHR52
BGLU91
BHOH228
BHOH237
BHOH248
BHOH249

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE 8OD B 600
ChainResidue
AARG82
A8OD600
BTHR81
BARG82
BGLU83
BGLY106
BTHR127
BGLY129
BARG130
BPHE161
BHOH226

site_idAC5
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 8OP C 501
ChainResidue
ALYS190
AGLU194
BGLN44
BASN204
BILE206
BHOH208
CTYR110
CGLY111
CLYS114
CGLN137
CHOH211
CHOH226
CHOH230
CHOH244
CHOH277

site_idAC6
Number of Residues12
DetailsBINDING SITE FOR RESIDUE 8OP C 500
ChainResidue
CLEU21
CTHR23
CTHR25
CGLU28
CGLY48
CTHR49
CGLY50
CLYS51
CTHR52
CLEU53
CGLU91
DLYS112

site_idAC7
Number of Residues18
DetailsBINDING SITE FOR RESIDUE 8OD C 600
ChainResidue
DARG82
D8OD600
AARG195
AHOH226
CPRO80
CTHR81
CARG82
CGLU83
CGLY106
CTHR127
CGLY129
CARG130
CMET159
CPHE161
CHOH210
CHOH214
CHOH254
CHOH255

site_idAC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE 8OP D 500
ChainResidue
DPHE3
DLEU21
DTHR23
DPRO24
DTHR25
DGLU28
DGLY50
DLYS51
DTHR52
DGLU91

site_idAC9
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 8OD D 600
ChainResidue
CARG82
C8OD600
DTHR81
DARG82
DGLU83
DGLY106
DTHR127
DGLY129
DARG130
DMET159
DPHE161
DHOH217
DHOH240
DHOH245
DHOH248

Functional Information from PROSITE/UniProt
site_idPS00039
Number of Residues9
DetailsDEAD_ATP_HELICASE DEAD-box subfamily ATP-dependent helicases signature. VLDEADEmL
ChainResidueDetails
AVAL149-LEU157

219869

PDB entries from 2024-05-15

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