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3MZE

Structure of penicillin-binding protein 5 from E.coli: cefoxitin acyl-enzyme complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000270biological_processpeptidoglycan metabolic process
A0004180molecular_functioncarboxypeptidase activity
A0005515molecular_functionprotein binding
A0005886cellular_componentplasma membrane
A0006508biological_processproteolysis
A0008233molecular_functionpeptidase activity
A0008360biological_processregulation of cell shape
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0009002molecular_functionserine-type D-Ala-D-Ala carboxypeptidase activity
A0009252biological_processpeptidoglycan biosynthetic process
A0030288cellular_componentouter membrane-bounded periplasmic space
A0042803molecular_functionprotein homodimerization activity
A0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE CFX A 364
ChainResidue
AALA43
APHE245
AARG248
ASER44
ALYS47
ASER87
AASN112
ATHR214
AGLY215
AHIS216
ATHR217

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 365
ChainResidue
AASN134
AASN138
AHIS146
AVAL313
AASN333
AGLN343

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 366
ChainResidue
AGLU65
AILE103
AARG104
AILE182

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 367
ChainResidue
AASP37
ALYS143
AARG163

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 368
ChainResidue
ATYR25
AGLN170
AARG174
AHOH437

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Acyl-ester intermediate
ChainResidueDetails
ASER44

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
ALYS47

site_idSWS_FT_FI3
Number of Residues1
DetailsACT_SITE:
ChainResidueDetails
ASER110

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING:
ChainResidueDetails
ALYS213

219869

PDB entries from 2024-05-15

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