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3FKR

Structure of L-2-keto-3-deoxyarabonate dehydratase complex with pyruvate

Functional Information from GO Data
ChainGOidnamespacecontents
A0005829cellular_componentcytosol
A0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
A0016829molecular_functionlyase activity
A0019568biological_processarabinose catabolic process
A0019570biological_processL-arabinose catabolic process to 2-oxoglutarate
A0042803molecular_functionprotein homodimerization activity
A0047449molecular_function2-dehydro-3-deoxy-L-arabinonate dehydratase activity
B0005829cellular_componentcytosol
B0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
B0016829molecular_functionlyase activity
B0019568biological_processarabinose catabolic process
B0019570biological_processL-arabinose catabolic process to 2-oxoglutarate
B0042803molecular_functionprotein homodimerization activity
B0047449molecular_function2-dehydro-3-deoxy-L-arabinonate dehydratase activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 401
ChainResidue
AHIS220
AGLU303
AALA306
AARG310
AHOH694
AHOH820
AHOH858
AHOH944
AHOH1047

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 A 404
ChainResidue
AGLU184
ATHR185
AGLY187
AALA188
AGLU210
ATHR214
AARG267
AHOH510
AHOH513
AHOH695
AHOH816

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 405
ChainResidue
AARG288
APRO289
AHIS291
AMET293
AGLU295
AHOH566
AHOH623
AHOH958
AHOH1114

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA A 409
ChainResidue
AKPI182
AGLU184
AHOH1087

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 B 402
ChainResidue
BHIS220
BALA306
BARG310
BHOH756
BHOH786
BHOH853
BHOH1001

site_idAC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 B 403
ChainResidue
BGLU184
BTHR185
BGLY187
BALA188
BGLU210
BTHR214
BARG267
BHOH567
BHOH591
BHOH636
BHOH872

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 B 406
ChainResidue
BARG44
BASP47
BHOH724
BHOH1091

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 B 407
ChainResidue
AASP312
AARG317
BASP234
BARG317
BHOH646
BHOH1026

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 408
ChainResidue
BKPI182
BGLU184
BHOH895
BHOH1046

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Schiff-base intermediate with substrate => ECO:0000250
ChainResidueDetails
AKPI182
BKPI182

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PDB entries from 2024-06-12

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