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3D2X

Structure of the thiamine pyrophosphate-specific riboswitch bound to oxythiamine pyrophosphate

Functional Information from PDB Data
site_id1
Number of Residues
Details
ChainResidue

site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG A 78
ChainResidue
AA29
AHOH92

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 79
ChainResidue
AG28
AHOH93
AHOH139

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 80
ChainResidue
AHOH136
AG48
AG66
AD2X85
AHOH135

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 81
ChainResidue
AC51
AA52
AHOH140
AHOH141

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 82
ChainResidue
AD2X85
AHOH117
AHOH137

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE MG A 83
ChainResidue
AG1

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 84
ChainResidue
AG42
AC65
AHOH129
AHOH143
AHOH145

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG B 78
ChainResidue
BA29
BHOH139

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 79
ChainResidue
BG48
BG66
BD2X84
BHOH100
BHOH125
BHOH133

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 80
ChainResidue
AHOH142
BC51
BA52
BHOH99
BHOH126
BHOH136

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 81
ChainResidue
BU63
BD2X84
BHOH95
BHOH103
BHOH123
BHOH124

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 82
ChainResidue
BG28
BHOH127
BHOH128
BHOH129

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG B 83
ChainResidue
BHOH130
BHOH131
BHOH132

site_idBC5
Number of Residues14
DetailsBINDING SITE FOR RESIDUE D2X A 85
ChainResidue
AG11
AG28
AG30
AA31
AC45
AG60
AC65
AG66
AMG80
AMG82
AHOH117
AHOH135
AHOH136
AHOH138

site_idBC6
Number of Residues15
DetailsBINDING SITE FOR RESIDUE D2X B 84
ChainResidue
BG11
BU12
BG28
BG30
BA31
BC45
BG60
BC65
BG66
BMG79
BMG81
BHOH95
BHOH123
BHOH133
BHOH134

220113

PDB entries from 2024-05-22

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