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3CP6

Crystal structure of human farnesyl diphosphate synthase (T201A mutant) complexed with Mg and biphosphonate inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0008299biological_processisoprenoid biosynthetic process
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 501
ChainResidue
AASP103
AASP107
AHOH505
AHOH548

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 502
ChainResidue
AASP243
AHOH537
AHOH617
AHOH620

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 503
ChainResidue
AASP107
AHOH510
AHOH521
AHOH558
AASP103

site_idAC4
Number of Residues19
DetailsBINDING SITE FOR RESIDUE RSX A 401
ChainResidue
AASP103
AASP107
AARG112
AGLN171
ALYS200
ATYR204
AGLN240
AASP243
ALYS257
AHOH505
AHOH507
AHOH510
AHOH537
AHOH548
AHOH558
AHOH568
AHOH617
AHOH619
AHOH620

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. MGefFQIqDDYlD
ChainResidueDetails
AMET235-ASP247

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVaDDim..DssltRRG
ChainResidueDetails
ALEU100-GLY114

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:16684881, ECO:0007744|PDB:1ZW5
ChainResidueDetails
AGLY123
ALEU126
AGLN162
AILE169
ALEU173
APRO179

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING:
ChainResidueDetails
AALA178
ALYS266
ACYS267
AGLU306
ASER323

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ATYR332

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Important for determining product chain length => ECO:0000250
ChainResidueDetails
ASER164
ATYR165

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
ChainResidueDetails
AGLY123

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS353

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1fps
ChainResidueDetails
AARG112
APHE239

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PDB entries from 2024-05-01

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